RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 C6orf15Q6UXA7 325 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-208ENST00000494334 TIFABQ6ZNK6 161 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 PAQR7Q86WK9 346 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 NLGN4XQ8N0W4 816 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 SLC38A9Q8NBW4 561 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 GALNT6Q8NCL4 622 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 NLGN4YQ8NFZ3 816 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-208ENST00000494334 PRAP1Q96NZ9 151 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 GPR78Q96P69 363 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 ATOH8Q96SQ7 321 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 TMEM184CQ9NVA4 438 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 ZNF358Q9NW07 568 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 PSMC3IPQ9P2W1 217 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-208ENST00000494334 RAB21Q9UL25 225 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 RNF112Q9ULX5 631 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 IQANK1A0A1B0GTG1 560 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 TAPBPO15533 448 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ZNF749O43361 778 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 KERAO60938 352 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
COL1A1-208ENST00000494334 RFPL1O75677 317 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 OR2B3O76000 313 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 HRH2P25021 359 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 GDF5P43026 501 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SLC6A12P48065 614 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 GLRBP48167 497 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ATP1A2P50993 1020 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 TLE3Q04726 772 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SRSF6Q13247 344 aaKnown RBP12.98□□□□□ -0.33
COL1A1-208ENST00000494334 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SULT1C3Q6IMI6 304 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ADCK2Q7Z695 626 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 THOC6Q86W42 341 aaKnown RBP12.98□□□□□ -0.33
COL1A1-208ENST00000494334 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ESX1Q8N693 406 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 PDPRQ8NCN5 879 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 RHEBL1Q8TAI7 183 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 CAVIN3Q969G5 261 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 MTBPQ96DY7 904 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ZNF285Q96NJ3 590 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 HAUS8Q9BT25 410 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SYNPO2LQ9H987 977 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 AKIRIN1Q9H9L7 192 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-208ENST00000494334 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 CD274Q9NZQ7 290 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 PTBP2Q9UKA9 531 aaKnown RBP12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SLC22A14Q9Y267 594 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 SDK2Q58EX2 2172 aa12.98□□□□□ -0.33
COL1A1-208ENST00000494334 LAMA5O15230 3695 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 CCDC189A1A4V9 331 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 HAT1O14929 419 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ZSCAN9O15535 394 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 EFSO43281 561 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 SRPX2O60687 465 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 MT-ND3P03897 115 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 CDH1P12830 882 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 MTHFD2P13995 350 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 GGT5P36269 586 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 CSNK1G2P78368 415 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 RELAQ04206 551 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 GPS2Q13227 327 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 FBXO48Q5FWF7 155 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 TLDC1Q6P9B6 456 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 TDRPQ86YL5 185 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 PLD3Q8IV08 490 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 KLHDC8AQ8IYD2 350 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 TCAIMQ8N3R3 496 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 IL22RA1Q8N6P7 574 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 MZB1Q8WU39 189 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 EXT2Q93063 718 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ESAMQ96AP7 390 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 OR2A5Q96R48 311 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 SELENOSQ9BQE4 189 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ACTR5Q9H9F9 607 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 LHX9Q9NQ69 397 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ENAMQ9NRM1 1142 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 STARD5Q9NSY2 213 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 PCMTD2Q9NV79 361 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 WWOXQ9NZC7 414 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms