RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PEX5LQ8IYB4 626 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CIARTQ8N365 385 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RAB42Q8N4Z0 105 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF611Q8N823 705 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MRPL43Q8N983 215 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 KLHDC9Q8NEP7 349 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 DBF4BQ8NFT6 615 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MRGPRDQ8TDS7 321 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 HSD17B8Q92506 261 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TAF4BQ92750 862 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 DAZLQ92904 295 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MOB3AQ96BX8 217 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 LGALS12Q96DT0 336 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SPDL1Q96EA4 605 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 GIMAP5Q96F15 307 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM237Q96Q45 408 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MYADMQ96S97 322 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CPNE1Q99829 537 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 C16orf70Q9BSU1 422 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 KATNB1Q9BVA0 655 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 FNDC11Q9BVV2 318 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 C1orf21Q9H246 121 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PRMT8Q9NR22 394 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PNPLA3Q9NST1 481 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ANO10Q9NW15 660 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SLCO1C1Q9NYB5 712 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CYP39A1Q9NYL5 469 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 NPAP1Q9NZP6 1156 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 AKAP7Q9P0M2 348 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SEPT10Q9P0V9 454 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RHCGQ9UBD6 479 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TRPC4Q9UBN4 977 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TMCC3Q9ULS5 477 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ABT1Q9ULW3 272 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 GAB2Q9UQC2 676 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PCDHGA1Q9Y5H4 931 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.19□□□□□ -2.061e-6■■■■□ 23.1
LMNB1-207ENST00000494185 SPIN1Q9Y657 262 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TEX13DA0A0J9YY54 714 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 SLC9B1P1A6NJY1 282 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 HHLA1C9JL84 531 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ARHGEF9O43307 516 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 XRCC3O43542 346 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 BCAS2O75934 225 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PGLSO95336 258 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PIGNO95427 931 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PAK4O96013 591 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CGAP01215 116 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GH1P01241 217 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 C9P02748 559 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 FAM200BP0CF97 657 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 FAM157CP0CG43 387 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PCP11498 1178 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 MYL6BP14649 208 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 EPCAMP16422 314 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CYP11B2P19099 503 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ITIH1P19827 911 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 NR1D1P20393 614 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 MSH3P20585 1137 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CA6P23280 308 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CD27P26842 260 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GABRA5P31644 462 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 KIF5BP33176 963 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 WNT5AP41221 380 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 IER3P46695 156 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GLIPR1P48060 266 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 LHX1P48742 406 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 THOP1P52888 689 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 YBEYP58557 167 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PTENP60484 403 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 DLK1P80370 383 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PRKAA1Q13131 559 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 RBM39Q14498 530 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 TAZQ16635 292 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 MRGPRG-AS1Q2M3A8 158 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 KRTAP27-1Q3LI81 207 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 KIAA1644Q3SXP7 199 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 GTDC1Q4AE62 458 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 AARDQ4LEZ3 155 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ETFRF1Q6IPR1 90 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CASC4Q6P4E1 433 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ARHGAP11AQ6P4F7 1023 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 LINGO4Q6UY18 593 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM182Q6ZP80 229 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 KCTD9Q7L273 389 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 PLD3Q8IV08 490 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 CRYBG2Q8N1P7 616 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 AMER3Q8N944 861 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 SLC4A11Q8NBS3 891 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ADAD2Q8NCV1 583 aaKnown RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 DDHD1Q8NEL9 900 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 LPCAT1Q8NF37 534 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 OR2AJ1Q8NGZ0 328 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ZFAND2BQ8WV99 257 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 HEXDCQ8WVB3 486 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 ST6GALNAC6Q969X2 333 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 OTUB1Q96FW1 271 aaPredicted RBP2.18□□□□□ -2.06
LMNB1-207ENST00000494185 LRR1Q96L50 414 aa2.18□□□□□ -2.06
LMNB1-207ENST00000494185 SPATA33Q96N06 139 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms