RNA–Protein interactions for RNA: ENST00000494163.1

IFT172-215, Transcript of intraflagellar transport 172, human

TSL 3

Gene IFT172, Length 607 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-215	ENST00000494163	SNRNP200	O75643	2136 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	TLDC2	A0PJX2	215 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SUPT3H	B4E1H0	165 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	STMND1	H3BQB6	276 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163		H7BY64	318 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	UBXN8	O00124	270 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	TAPBP	O15533	448 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	HCRTR1	O43613	425 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	CTSV	O60911	334 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	ERLIN1	O75477	346 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SUPT3H	O75486	399 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	STK17B	O94768	372 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	IPO13	O94829	963 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	KRT15	P19012	456 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	GGT5	P36269	586 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SLC6A12	P48065	614 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	ITGA1	P56199	1179 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	C18orf21	Q32NC0	220 aa	Predicted RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	TECRL	Q5HYJ1	363 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	PWWP2B	Q6NUJ5	590 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	RNF44	Q7L0R7	432 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	ADCK2	Q7Z695	626 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	LCA5	Q86VQ0	697 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	THOC6	Q86W42	341 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	MCAT	Q8IVS2	390 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	RIBC1	Q8N443	379 aa	Predicted RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	ZNF248	Q8NDW4	579 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SCYL1	Q96KG9	808 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	PRAP1	Q96NZ9	151 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	OR4K3	Q96R72	315 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	TMEM79	Q9BSE2	394 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	ULBP3	Q9BZM4	244 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SPRY4	Q9C004	299 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	CNOT10	Q9H9A5	744 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	PTBP2	Q9UKA9	531 aa	Known RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	PLAA	Q9Y263	795 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	SLC22A14	Q9Y267	594 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	DYRK1B	Q9Y463	629 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	PCM1	Q15154	2024 aa		13.81	□□□□□ -0.2
IFT172-215	ENST00000494163	FREM2	Q5SZK8	3169 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163		A0A0J9YVX5	310 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	CCDC151	A5D8V7	595 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163		E7EQ34	232 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	TAF4	O00268	1085 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	MAP2K7	O14733	419 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	NRP2	O60462	931 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	SRPX2	O60687	465 aa	Predicted RBP	13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	SCRG1	O75711	98 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	STK16	O75716	305 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	KIAA0754	O94854	1291 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	WDR47	O94967	919 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	TIAF1	O95411	115 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	DLGAP3	O95886	979 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	LIPC	P11150	499 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	PYGB	P11216	843 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	MTHFD2	P13995	350 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	ZNF28	P17035	718 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	GDF5	P43026	501 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	HSPA7	P48741	367 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	RELA	Q04206	551 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	FBXO42	Q6P3S6	717 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	TMEM126B	Q8IUX1	230 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	GPR135	Q8IZ08	494 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	CYP4X1	Q8N118	509 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	SLC5A11	Q8WWX8	675 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	ZFYVE21	Q9BQ24	234 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	MRPL57	Q9BQC6	102 aa	Known RBP	13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	TMEM109	Q9BVC6	243 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	SPRTN	Q9H040	489 aa	Predicted RBP	13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	PILRA	Q9UKJ1	303 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	SH2B3	Q9UQQ2	575 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	RAX	Q9Y2V3	346 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	PCDHB3	Q9Y5E6	796 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	KCNE2	Q9Y6J6	123 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	ADAMTS20	P59510	1910 aa		13.8	□□□□□ -0.2
IFT172-215	ENST00000494163	URB1	O60287	2271 aa	Known RBP	13.79	□□□□□ -0.2
IFT172-215	ENST00000494163		A0A1W2PPM1	405 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163		H3BMH7	237 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	GOLGA8R	I6L899	631 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	OR2B3	O76000	313 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	CDH1	P12830	882 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	GFAP	P14136	432 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	EZR	P15311	586 aa	Known RBP	13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	EIF2S3	P41091	472 aa	Known RBP	13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	CCR8	P51685	355 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	CSNK1G2	P78368	415 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	FBXO48	Q5FWF7	155 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	TCTE1	Q5JU00	501 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	DTX1	Q86Y01	620 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	ABHD11	Q8NFV4	315 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	KCNE4	Q8WWG9	221 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	NEIL2	Q969S2	332 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	ESAM	Q96AP7	390 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	ZNF285	Q96NJ3	590 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	SELENOS	Q9BQE4	189 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	CAPS2	Q9BXY5	557 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	CD244	Q9BZW8	370 aa		13.79	□□□□□ -0.2
IFT172-215	ENST00000494163	MRPL46	Q9H2W6	279 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms