RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 ZNF470Q6ECI4 717 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 CCDC137Q6PK04 289 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 NEK10Q6ZWH5 1172 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 RNF44Q7L0R7 432 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 MCUQ8NE86 351 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 SSC4DQ8WTU2 575 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 INPP5DQ92835 1189 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 RERGQ96A58 199 aaPredicted RBP12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 CABS1Q96KC9 395 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 PKP4Q99569 1192 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 DPH7Q9BTV6 452 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 CRB3Q9BUF7 120 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 ACAT2Q9BWD1 397 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 YIPF2Q9BWQ6 316 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 AGPAT4Q9NRZ5 378 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 FBXL4Q9UKA2 621 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 COPG1Q9Y678 874 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 MAD1L1Q9Y6D9 718 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 MAU2Q9Y6X3 613 aa12.79□□□□□ -0.36
CTDSP1-212ENST00000494067 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 MDC1Q14676 2089 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 OR2A25A4D2G3 310 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 MYO1CO00159 1063 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 SOCS6O14544 535 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 RNF224P0DH78 156 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 ENO3P13929 434 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 CXCR2P25025 360 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 EFNA3P52797 238 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 PGGT1BP53609 377 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 PNLIPRP1P54315 467 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 EMP3P54852 163 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 RNASEH2BQ5TBB1 312 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 THEMIS2Q5TEJ8 643 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 UGT3A1Q6NUS8 523 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 FBXO42Q6P3S6 717 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 CYHR1Q6ZMK1 362 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 LRRC56Q8IYG6 542 aaPredicted RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 CISD2Q8N5K1 135 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 SNRNP40Q96DI7 357 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 C10orf90Q96M02 699 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 PSMG3-AS1Q96PY0 264 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 WDR83Q9BRX9 315 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 LHPPQ9H008 270 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 KLHL42Q9P2K6 505 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 CSAG2Q9Y5P2 127 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
CTDSP1-212ENST00000494067 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.36
CTDSP1-212ENST00000494067 DOPEY2Q9Y3R5 2298 aa12.77□□□□□ -0.36
CTDSP1-212ENST00000494067 PGRMC1O00264 195 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 MAP2K7O14733 419 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 FFAR3O14843 346 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 GPR42O15529 346 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 HAUS5O94927 633 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 DDAH2O95865 285 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 UQCRHP07919 91 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ANXA5P08758 320 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 MPC1LP0DKB6 136 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 FBLP22087 321 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ABATP80404 500 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 NDUFA9Q16795 377 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ADCK2Q7Z695 626 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 PARP9Q8IXQ6 854 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 PALM2Q8IXS6 379 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ARHGEF39Q8N4T4 335 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 DNAJB14Q8TBM8 379 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 STT3BQ8TCJ2 826 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 CD200R1Q8TD46 325 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ZNF480Q8WV37 535 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 C19orf60Q96EN9 201 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 MVB12AQ96EY5 273 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 PWWP2AQ96N64 755 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 WDR77Q9BQA1 342 aaPredicted RBP12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 PLCD4Q9BRC7 762 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 C20orf96Q9NUD7 363 aaPredicted RBP12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 TAC3Q9UHF0 121 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 DOCK10Q96BY6 2186 aa12.77□□□□□ -0.37
CTDSP1-212ENST00000494067 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 VSTM2BA6NLU5 285 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 H0YGG7 62 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PCDH17O14917 1159 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 FANCGO15287 622 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms