RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CFAP58Q5T655 872 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 DOK6Q6PKX4 331 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 KIF6Q6ZMV9 814 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 PTAR1Q7Z6K3 402 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 FAM89BQ8N5H3 189 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 SLC37A3Q8NCC5 494 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 OR6S1Q8NH40 331 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ZNF519Q8TB69 540 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 FAM222BQ8WU58 562 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ARHGAP45Q92619 1136 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 THOC1Q96FV9 657 aaKnown RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 OVOL2Q9BRP0 275 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 TDRD1Q9BXT4 1180 aaKnown RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ANKEF1Q9NU02 776 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 NDE1Q9NXR1 346 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 KLK13Q9UKR3 277 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ANGPTL3Q9Y5C1 460 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 SORBS2O94875 1100 aaKnown RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 CELF2O95319 508 aaKnown RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 MYOGP15173 224 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 SP100P23497 879 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 DLK1P80370 383 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 ACSM1Q08AH1 577 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 AIMP1Q12904 312 aaKnown RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 CALCOCO2Q13137 446 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 VEZF1Q14119 521 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 TRIM29Q14134 588 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 GPR33Q49SQ1 333 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 TCP11X2Q5H9J9 407 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 C6orf163Q5TEZ5 329 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 CLEC4GQ6UXB4 293 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 FRRS1Q6ZNA5 592 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 NOA1Q8NC60 698 aaKnown RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 ANKRD9Q96BM1 317 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-216ENST00000493758 SPAG5Q96R06 1193 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 SLC25A23Q9BV35 468 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 TXLNGYQ9BZA5 131 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 GSN-AS1Q9NRJ2 163 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 RNF150Q9ULK6 438 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 WIPI2Q9Y4P8 454 aa3.59□□□□□ -1.83
ITGB1-216ENST00000493758 A0A1W2PPR1 153 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 A8MXE2 369 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 E9PQ18 207 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 PI15O43692 258 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 DUS4LO95620 317 aaKnown RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 BAG3O95817 575 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 ATP1B1P05026 303 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 LDHCP07864 332 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 GATA1P15976 413 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 ACHEP22303 614 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 CPT2P23786 658 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 CD27P26842 260 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 TSFMP43897 325 aaKnown RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 TMEM50BP56557 158 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 ELAVL2Q12926 359 aaKnown RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 TMEM266Q2M3C6 531 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 SNAI3Q3KNW1 292 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 KRT80Q6KB66 452 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 SLC30A6Q6NXT4 461 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 NOTUMQ6P988 496 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 TLK2Q86UE8 772 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 PI4KAP1Q8N8J0 262 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 OR5T2Q8NGG2 359 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 SPSB1Q96BD6 273 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 IWS1Q96ST2 819 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 PRRG4Q9BZD6 226 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 HOXD1Q9GZZ0 328 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 UPF3AQ9H1J1 476 aaKnown RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 DNAJC4Q9NNZ3 241 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 TEX10Q9NXF1 929 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 NKIRAS2Q9NYR9 191 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-216ENST00000493758 CHKBQ9Y259 395 aa3.58□□□□□ -1.84
ITGB1-216ENST00000493758 LOC105371242A0A075B767 164 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 AP5Z1O43299 807 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 SNX3O60493 162 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 MAGEC1O60732 1142 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 SLCO2B1O94956 709 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 ACSL3O95573 720 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 RPL35AP18077 110 aaKnown RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 LHCGRP22888 699 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 BDNFP23560 247 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 TLX1P31314 330 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 OR3A2P47893 321 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 DNA2P51530 1060 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 SLC8A3P57103 927 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 RBPJQ06330 500 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 NECTIN1Q15223 517 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 MOGAT2Q3SYC2 334 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 FAM174BQ3ZCQ3 159 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 ZBTB49Q6ZSB9 765 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 FCRLAQ7L513 359 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 IGSF1Q8N6C5 1336 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 LSMEM1Q8N8F7 131 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 KCTD6Q8NC69 237 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms