RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAAH2Q6GMR7 532 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 TMEM205Q6UW68 189 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 Q6ZPB1 254 aaPredicted RBP16.78■□□□□ 0.28
NUP50-218ENST00000493456 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 OR4L1Q8NH43 312 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 LKAAEAR1Q8TD35 194 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 SPOCK3Q9BQ16 436 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 YIPF2Q9BWQ6 316 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 STMN3Q9NZ72 180 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 ZNF835Q9Y2P0 537 aa16.78■□□□□ 0.28
NUP50-218ENST00000493456 RCCD1A6NED2 376 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 NRP2O60462 931 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 C1orf105O95561 183 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 ANXA5P08758 320 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 CCNFP41002 786 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 PMP22Q01453 160 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.28
NUP50-218ENST00000493456 ZNF33BQ06732 778 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 CDH17Q12864 832 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 FASTKD1Q53R41 847 aaKnown RBP16.77■□□□□ 0.28
NUP50-218ENST00000493456 KRTCAP3Q53RY4 240 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 ZNF766Q5HY98 468 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 AARS2Q5JTZ9 985 aaKnown RBP16.77■□□□□ 0.28
NUP50-218ENST00000493456 GARNL3Q5VVW2 1013 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 NEK10Q6ZWH5 1172 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 CEP97Q8IW35 865 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 OR2A1Q8NGT9 310 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 MAGEC3Q8TD91 643 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 ADAMTS18Q8TE60 1221 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 GPR137Q96N19 417 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 SPATA7Q9P0W8 599 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 STOX2Q9P2F5 926 aaPredicted RBP16.77■□□□□ 0.28
NUP50-218ENST00000493456 MEMO1Q9Y316 297 aa16.77■□□□□ 0.28
NUP50-218ENST00000493456 NIPBLQ6KC79 2804 aaeCLIP16.77■□□□□ 0.27
NUP50-218ENST00000493456 PCNX1Q96RV3 2341 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 IQCF5A8MTL0 148 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 H0YGG7 62 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 PRMT5O14744 637 aaPredicted RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 CMPK1P30085 196 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 KIR3DL1P43629 444 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 RWDD2BP57060 319 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 KRTAP10-9P60411 292 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 ARF3P61204 181 aaPredicted RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 ACVR1Q04771 509 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 TSTD2Q5T7W7 516 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 ZNF534Q76KX8 674 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 SPPL2CQ8IUH8 684 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 AMER3Q8N944 861 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 DNAAF3Q8N9W5 541 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 MMABQ96EY8 250 aaPredicted RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 CALR3Q96L12 384 aaKnown RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 IMMP1LQ96LU5 166 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 FOPNLQ96NB1 174 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 PANX3Q96QZ0 392 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 MCCC2Q9HCC0 563 aa16.76■□□□□ 0.27
NUP50-218ENST00000493456 TTC7AQ9ULT0 858 aaPredicted RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 RUVBL1Q9Y265 456 aaKnown RBP16.76■□□□□ 0.27
NUP50-218ENST00000493456 A0A1W2PPV9 198 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 GOLGA6L9A6NEM1 432 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 ERI2A8K979 691 aaKnown RBP16.75■□□□□ 0.27
NUP50-218ENST00000493456 FFAR3O14843 346 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 KPNA5O15131 536 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 GPR42O15529 346 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 TTI1O43156 1089 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 CYC1P08574 325 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 C8orf89P0DMQ9 161 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 BDKRB1P46663 353 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 PRAMEP78395 509 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 TLE4Q04727 773 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 FBXO42Q6P3S6 717 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 KRT222Q8N1A0 295 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 CSNK1A1LQ8N752 337 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 OR52K1Q8NGK4 314 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 OR6P1Q8NGX9 317 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 SKA2Q8WVK7 121 aaPredicted RBP16.75■□□□□ 0.27
NUP50-218ENST00000493456 PEX13Q92968 403 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 DPH7Q9BTV6 452 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 DRC3Q9H069 523 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 SLC2A6Q9UGQ3 507 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 ANAPC5Q9UJX4 755 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 MKL2Q9ULH7 1088 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 NFS1Q9Y697 457 aa16.75■□□□□ 0.27
NUP50-218ENST00000493456 CACNA1CQ13936 2221 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 AKR1B15C9JRZ8 316 aaPredicted RBP16.74■□□□□ 0.27
NUP50-218ENST00000493456 TXNDC9O14530 226 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 FANCGO15287 622 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ADRA1DP25100 572 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 TTPAP49638 278 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ALDH6A1Q02252 535 aaKnown RBP16.74■□□□□ 0.27
NUP50-218ENST00000493456 SEMA3AQ14563 771 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 CDSNQ15517 529 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 CCSMST1Q4G0I0 132 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 PLAG1Q6DJT9 500 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 PTRHD1Q6GMV3 140 aaKnown RBP16.74■□□□□ 0.27
NUP50-218ENST00000493456 OTOAQ7RTW8 1153 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ZC3H7AQ8IWR0 971 aaKnown RBP16.74■□□□□ 0.27
NUP50-218ENST00000493456 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 PHF10Q8WUB8 498 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms