RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	BZW2	Q9Y6E2	419 aa	Known RBP	5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TENM1	Q9UKZ4	2725 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	CR1	P17927	2039 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	EPPK1	P58107	5090 aa	Known RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	GRID2IP	A4D2P6	1211 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	SH3D21	A4FU49	640 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	OR14I1	A6ND48	311 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MGAT4D	A6NG13	374 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	SIGLEC16	A6NMB1	481 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ISM1	B1AKI9	464 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ANKRD66	B4E2M5	251 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602		F8VZ95	297 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	NDC80	O14777	642 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	CCP110	O43303	1012 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TCF21	O43680	179 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PRPSAP2	O60256	369 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MAFK	O60675	156 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MED26	O95402	600 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	SERPINC1	P01008	464 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TPM1	P09493	284 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	C8orf89	P0DMQ9	161 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PAX1	P15863	534 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MAG	P20916	626 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PTMS	P20962	102 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	GPD1	P21695	349 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	CA4	P22748	312 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MMP8	P22894	467 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PRKCI	P41743	596 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	GRIA3	P42263	894 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TNNT3	P45378	269 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF143	P52747	638 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ITGA8	P53708	1063 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	GPR85	P60893	370 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	RPL26	P61254	145 aa	Known RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	FMO1	Q01740	532 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	OCRL	Q01968	901 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MYL5	Q02045	173 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	DSC2	Q02487	901 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	AP1B1	Q10567	949 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	IHH	Q14623	411 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	STX1A	Q16623	288 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TCTE1	Q5JU00	501 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PRMT9	Q6P2P2	845 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TMEM205	Q6UW68	189 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	UNC5A	Q6ZN44	842 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	RFX8	Q6ZV50	586 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	IL17REL	Q6ZVW7	336 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PLEKHM3	Q6ZWE6	761 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	DET1	Q7L5Y6	550 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	BTLA	Q7Z6A9	289 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF227	Q86WZ6	799 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	LRRC49	Q8IUZ0	686 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	DEPDC4	Q8N2C3	294 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZFP62	Q8NB50	900 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	NAXE	Q8NCW5	288 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	OR2L2	Q8NH16	312 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	NAT14	Q8WUY8	206 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	METTL21A	Q8WXB1	218 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ISL2	Q96A47	359 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	IQCD	Q96DY2	449 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PIK3IP1	Q96FE7	263 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	C1orf159	Q96HA4	380 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	PEBP4	Q96S96	227 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	SELENOS	Q9BQE4	189 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	HGH1	Q9BTY7	390 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	CNPPD1	Q9BV87	410 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	POLR1E	Q9GZS1	481 aa	Known RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	RBSN	Q9H1K0	784 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	CXorf56	Q9H5V9	222 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	DHX35	Q9H5Z1	703 aa	Known RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZWILCH	Q9H900	591 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	BPIFA1	Q9NP55	256 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF701	Q9NV72	531 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	STOX2	Q9P2F5	926 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	LCMT1	Q9UIC8	334 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	MYO6	Q9UM54	1294 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	RPL26L1	Q9UNX3	145 aa	Known RBP	5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ICK	Q9UPZ9	632 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	DSCAM	O60469	2012 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF407	Q9C0G0	2248 aa		5.04	□□□□□ -1.6
SEC13-219	ENST00000492602	TCRBV5S1A1T	A0A578	114 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	LRRC10B	A6NIK2	292 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	FAM166B	A8MTA8	275 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	EEF1E1-BLOC1S5	C9J1V9	151 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	GOLGA6L19	H0YKK7	550 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ACOT7	O00154	380 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	IFRD1	O00458	451 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	GAPDHS	O14556	408 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	UBFD1	O14562	309 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	EEF1E1	O43324	174 aa	Known RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CHRM5	P08912	532 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	PIRT	P0C851	137 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	MYBL1	P10243	752 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	RARA	P10276	462 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	GABRA1	P14867	456 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	ITGA2	P17301	1181 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	CES1	P23141	567 aa		5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	TPP2	P29144	1249 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC13-219	ENST00000492602	IDUA	P35475	653 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms