RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SDCCAG3Q96C92 435 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 RSPRY1Q96DX4 576 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CCDC115Q96NT0 180 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 UGT2B28Q9BY64 529 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 DCAF13Q9NV06 445 aaKnown RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 STOX2Q9P2F5 926 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 PPIL1Q9Y3C6 166 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 H3BMQ9 156 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ACPPP15309 386 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ENGP17813 658 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 MAP4P27816 1152 aaKnown RBP12.05□□□□□ -0.48
HMGN1-220ENST00000492280 IMPA1P29218 277 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ESRRGP62508 458 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 HENMT1Q5T8I9 393 aaKnown RBP12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ELMSAN1Q6PJG2 1045 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-220ENST00000492280 TMEM159Q96B96 161 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 COG8Q96MW5 612 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-220ENST00000492280 IL17FQ96PD4 163 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ACAT2Q9BWD1 397 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 EMILIN2Q9BXX0 1053 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 SPNS1Q9H2V7 528 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 GORASP2Q9H8Y8 452 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 SGK2Q9HBY8 427 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 CKAP5Q14008 2032 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ENTPD1P49961 510 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 WNT3P56703 355 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 TUBA4AP68366 448 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 PPP2R2BQ00005 443 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 CD47Q08722 323 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 GAB1Q13480 694 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF77Q15935 545 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ANKDD1AQ495B1 522 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 BORAQ6PGQ7 559 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 XKR5Q6UX68 686 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 GPR149Q86SP6 731 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 TRAPPC5Q8IUR0 188 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 SYTL1Q8IYJ3 562 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 MMP21Q8N119 569 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 OR4K1Q8NGD4 311 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ASZ1Q8WWH4 475 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 GAB3Q8WWW8 586 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 NEIL2Q969S2 332 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 TPD52L3Q96J77 140 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 PKP4Q99569 1192 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 OR2AG1Q9H205 316 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 KCNH6Q9H252 994 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 FAM118AQ9NWS6 357 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 DNAJB9Q9UBS3 223 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 ACSL6Q9UKU0 697 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 TRPM6Q9BX84 2022 aa12.05□□□□□ -0.48
HMGN1-220ENST00000492280 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CFAP99D6REC4 459 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CLIC1O00299 241 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 XYLBO75191 536 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 FTH1P02794 183 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 HTR1AP08908 422 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 TFPTP0C1Z6 253 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 JUPP14923 745 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 HOXB9P17482 250 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 SLC6A11P48066 632 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 NRIP1P48552 1158 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 VLDLRP98155 873 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 MC1RQ01726 317 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ACSM2AQ08AH3 577 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 BIRC2Q13490 618 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ADRM1Q16186 407 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 C11orf91Q3C1V1 193 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 SPATS1Q496A3 300 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ACSM2BQ68CK6 577 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 LAIR2Q6ISS4 152 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF852Q6ZMS4 543 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 L3MBTL4Q8NA19 623 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF740Q8NDX6 193 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 HSPBAP1Q96EW2 488 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CMTM7Q96FZ5 175 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 SORBS1Q9BX66 1292 aaKnown RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 OSBPL10Q9BXB5 764 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 RIBC2Q9H4K1 309 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CFAP20Q9Y6A4 193 aaKnown RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 A0A096LPI6 279 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 GNG14A0A1W2PPG7 69 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 PRRT4C9JH25 899 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 RPS13P62277 151 aaKnown RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 POLR2LP62875 67 aaKnown RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 HPCAP84074 193 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 ZBED5Q49AG3 693 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CCNYL2Q5T2Q4 361 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 LRIF1Q5T3J3 769 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 BRAT1Q6PJG6 821 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 LIPIQ6XZB0 460 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms