RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TRIM56Q9BRZ2 755 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 DPH7Q9BTV6 452 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 MFRPQ9BY79 579 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 TGIF2Q9GZN2 237 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 XAB2Q9HCS7 855 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF304Q9HCX3 659 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 SLAMF7Q9NQ25 335 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 FAM114A2Q9NRY5 505 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ASF1BQ9NVP2 202 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 DHRS7Q9Y394 339 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 FAM169AQ9Y6X4 670 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 LOC102723996A0A087X1L8 192 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 A0A0J9YVX5 310 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 PCDH17O14917 1159 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 FOXS1O43638 330 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 USP1O94782 785 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 HPP00738 406 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 RNF224P0DH78 156 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ENO3P13929 434 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 EZRP15311 586 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 CHRM3P20309 590 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 IVDP26440 423 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 CMPK1P30085 196 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 CARSP49589 748 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 PNLIPRP1P54315 467 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ABATP80404 500 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 KLC1Q07866 573 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 MRPL49Q13405 166 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 RAPSNQ13702 412 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 DSG2Q14126 1118 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 DHX34Q14147 1143 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 FAM53BQ14153 422 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 TRIP13Q15645 432 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 KCTD19Q17RG1 926 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 AGAP7PQ5VUJ5 663 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ICE2Q659A1 982 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 DENND6AQ8IWF6 608 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 CISD2Q8N5K1 135 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 AMER3Q8N944 861 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 STT3BQ8TCJ2 826 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ACTRT1Q8TDG2 376 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 SSC4DQ8WTU2 575 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 PSMF1Q92530 271 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 TM9SF4Q92544 642 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 SLCO2A1Q92959 643 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 MAGOHBQ96A72 148 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 MS4A14Q96JA4 679 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 AGAP4Q96P64 663 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 WDR77Q9BQA1 342 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 MESP1Q9BRJ9 268 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 LHPPQ9H008 270 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 LUZP4Q9P127 313 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF282Q9UDV7 671 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 CDC23Q9UJX2 597 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 NTNG1Q9Y2I2 539 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 COMMD10Q9Y6G5 202 aa7.98□□□□□ -1.13
SMARCB1-207ENST00000491967 SCN3AQ9NY46 2000 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF839A8K0R7 811 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CES2O00748 559 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TXNDC9O14530 226 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 KIF5CO60282 957 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 HAUS5O94927 633 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 LDLRP01130 860 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CATP04040 527 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CYC1P08574 325 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 HRH2P25021 359 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 GABRB3P28472 473 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 SOX11P35716 441 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TSFMP43897 325 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CBLBQ13191 982 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CTBP1Q13363 440 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 LONRF1Q17RB8 773 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 EIF2S3LQ2VIR3 472 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TTLL9Q3SXZ7 439 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 RNASEH2BQ5TBB1 312 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 B3GNTL1Q67FW5 361 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF324BQ6AW86 544 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF470Q6ECI4 717 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 RPUSD3Q6P087 351 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CCDC137Q6PK04 289 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TMEM205Q6UW68 189 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 SUSD1Q6UWL2 747 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 NDUFAF7Q7L592 441 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 PCGF5Q86SE9 256 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 GALNT7Q86SF2 657 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CNTN4Q8IWV2 1026 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 C2CD4AQ8NCU7 369 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CD200R1Q8TD46 325 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 SKA2Q8WVK7 121 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 FAM136AQ96C01 138 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 TM4SF19Q96DZ7 209 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 VPS50Q96JG6 964 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 NAP1L3Q99457 506 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC29A3Q9BZD2 475 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 SOX17Q9H6I2 414 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 MRPS30Q9NP92 439 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms