RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZIC1Q15915 447 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM153CQ494X1 144 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 PRR30Q53SZ7 412 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 CTSL3PQ5NE16 218 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ZNF549Q6P9A3 640 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 UNC5DQ6UXZ4 953 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 RAPH1Q70E73 1250 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 AMIGO1Q86WK6 493 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 SYTL1Q8IYJ3 562 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 MYO1HQ8N1T3 1032 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 LMNTD1Q8N9Z9 388 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 LKAAEAR1Q8TD35 194 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 MCOLN3Q8TDD5 553 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 RAD51AP1Q96B01 352 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 CLIP3Q96DZ5 547 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 MRRFQ96E11 262 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 NDNQ99608 321 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 GPR21Q99679 349 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 RBBP8Q99708 897 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC7A5P2Q9GIP4 190 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ING2Q9H160 280 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 TFB2MQ9H5Q4 396 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 VIPAS39Q9H9C1 493 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ACTR5Q9H9F9 607 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 PLAC1Q9HBJ0 212 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 POPDC3Q9HBV1 291 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 MLXIPLQ9NP71 852 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 LUZP4Q9P127 313 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 TCFL5Q9UL49 500 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 PLAGL1Q9UM63 463 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 SNX7Q9UNH6 387 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ITPR2Q14571 2701 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 IQANK1A0A1B0GTG1 560 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 BLACEA4D250 179 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ZNF839A8K0R7 811 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 CXorf49A8MYA2 514 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 C2orf74A8MZ97 194 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 SORBS2O94875 1100 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 CATP04040 527 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 CD63P08962 238 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 HBQ1P09105 142 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 RAB40ALP0C0E4 278 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 UGT2B7P16662 529 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 CYP2A7P20853 494 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ACADLP28330 430 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 TYK2P29597 1187 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 HSD17B2P37059 387 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 GABRA4P48169 554 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 CLCN7P51798 805 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 PGDP52209 483 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 IFFO1Q0D2I5 559 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 PAQR3Q6TCH7 311 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 SPESP1Q6UW49 350 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ATCAYQ86WG3 371 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM20CQ8IXL6 584 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 FDCSPQ8NFU4 85 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 UHMK1Q8TAS1 419 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 MTBPQ96DY7 904 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 PDLIM5Q96HC4 596 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 TSNARE1Q96NA8 513 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 OR2A14Q96R47 310 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC25A23Q9BV35 468 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 NUDT9Q9BW91 350 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 NLNQ9BYT8 704 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ACBD3Q9H3P7 528 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 GPAMQ9HCL2 828 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 ACSS2Q9NR19 701 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 SMYD2Q9NRG4 433 aa10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 TDRKHQ9Y2W6 561 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 MTO1Q9Y2Z2 717 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-211ENST00000491685 MASP2O00187 686 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC16A5O15375 505 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ZNF749O43361 778 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 KLHL41O60662 606 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 CNOT3O75175 753 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 CEACAM4O75871 244 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 C8GP07360 202 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SNRPAP09012 282 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 MSL3P1P0C860 447 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 RNF224P0DH78 156 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 FDXRP22570 491 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 GNLYP22749 145 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SHMT2P34897 504 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 RAB10P61026 200 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 RAPSNQ13702 412 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ATP1A4Q13733 1029 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 NCF4Q15080 339 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 MROH9Q5TGP6 573 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 C1orf189Q5VU69 101 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 HIST2H2BCQ6DN03 193 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 TBC1D1Q86TI0 1168 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 HPS6Q86YV9 775 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 VRK3Q8IV63 474 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 C19orf47Q8N9M1 422 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms