RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FLVCR1-AS1Q8TAF5 88 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 NAT9Q9BTE0 207 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 SPRTNQ9H040 489 aaPredicted RBP9.94□□□□□ -0.82
TTC28-207ENST00000490475 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
TTC28-207ENST00000490475 PPANQ9NQ55 473 aaKnown RBP9.94□□□□□ -0.82
TTC28-207ENST00000490475 AGPAT4Q9NRZ5 378 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 SEMA3GQ9NS98 782 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 SPHK1Q9NYA1 384 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 MAP10Q9P2G4 905 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 DHCR7Q9UBM7 475 aaKnown RBP9.94□□□□□ -0.82
TTC28-207ENST00000490475 FBXO5Q9UKT4 447 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 CDYLQ9Y232 598 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 NOTCH2Q04721 2471 aa9.94□□□□□ -0.82
TTC28-207ENST00000490475 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 ZNF839A8K0R7 811 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 E7ESA3 106 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 DSCR3O14972 297 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.82
TTC28-207ENST00000490475 AHSGP02765 367 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 ESR1P03372 595 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 TPBGLP0DKB5 382 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 PKMP14618 531 aaKnown RBP9.93□□□□□ -0.82
TTC28-207ENST00000490475 GABRB3P28472 473 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 ATP5DP30049 168 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 HSD17B2P37059 387 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 GUCY2DQ02846 1103 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 DEFB110Q30KQ9 67 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 C4orf17Q53FE4 359 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 TEX35Q5T0J7 233 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 C1orf189Q5VU69 101 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 PRMT9Q6P2P2 845 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 TRMT10BQ6PF06 316 aaKnown RBP9.93□□□□□ -0.82
TTC28-207ENST00000490475 FIGLAQ6QHK4 219 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 ZDHHC24Q6UX98 284 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 TTLL10Q6ZVT0 673 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 ZBED8Q8IZ13 594 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 MMGT1Q8N4V1 131 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 CFAP61Q8NHU2 1237 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 HMGCLL1Q8TB92 370 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 CALML6Q8TD86 181 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 LRRC39Q96DD0 335 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 SELENOSQ9BQE4 189 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 SAYSD1Q9NPB0 183 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 CUTCQ9NTM9 273 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 INTS10Q9NVR2 710 aaKnown RBP9.93□□□□□ -0.82
TTC28-207ENST00000490475 SPATA7Q9P0W8 599 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 DMGDHQ9UI17 866 aaKnown RBP9.93□□□□□ -0.82
TTC28-207ENST00000490475 KLK4Q9Y5K2 254 aa9.93□□□□□ -0.82
TTC28-207ENST00000490475 DOPEY1Q5JWR5 2465 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CTAGE15A4D2H0 777 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 FITM1A5D6W6 292 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 NDC80O14777 642 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CTAGE8P0CG41 777 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 ITGA3P26006 1051 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 UQCRFS1P47985 274 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 EMP3P54852 163 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 ADARP55265 1226 aaKnown RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 AP2B1P63010 937 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 OCA2Q04671 838 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CBLBQ13191 982 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 ARHGAP19Q14CB8 494 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 TEDDM1Q5T9Z0 273 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 AGAP7PQ5VUJ5 663 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 PRAMEF13Q5VWM6 474 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 STEAP4Q687X5 459 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 C8orf74Q6P047 294 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CAPN12Q6ZSI9 719 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CTAGE6Q86UF2 777 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CTAGE4Q8IX94 777 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 LMNTD1Q8N9Z9 388 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 Q8NA96 180 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 LINC01555Q8NAE3 123 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 C2CD4AQ8NCU7 369 aaPredicted RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 FBXO25Q8TCJ0 367 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 PYROXD1Q8WU10 500 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 SKA2Q8WVK7 121 aaPredicted RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 MVB12AQ96EY5 273 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 CERS2Q96G23 380 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 ZNF285Q96NJ3 590 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 AGAP4Q96P64 663 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 SLC30A3Q99726 388 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 FAM167BQ9BTA0 163 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 EPS8L2Q9H6S3 715 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 ZNF552Q9H707 407 aaPredicted RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 FAM114A2Q9NRY5 505 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 PLEKHB1Q9UF11 243 aaPredicted RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 CIDEBQ9UHD4 219 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 CDC14AQ9UNH5 594 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 MED16Q9Y2X0 877 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 COPG1Q9Y678 874 aaKnown RBP9.92□□□□□ -0.82
TTC28-207ENST00000490475 POLEQ07864 2286 aa9.92□□□□□ -0.82
TTC28-207ENST00000490475 DOCK10Q96BY6 2186 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CCDC151A5D8V7 595 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms