RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LHCGRP22888 699 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 MT3P25713 68 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ALDH4A1P30038 563 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TLX1P31314 330 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 NKX2-1P43699 371 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 GMPSP49915 693 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 POU5F1Q01860 360 aaKnown RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 TNK1Q13470 666 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TUBB2AQ13885 445 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TWISTNBQ3B726 338 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 TMEM30BQ3MIR4 351 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 SPOUT1Q5T280 376 aaKnown RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 MPP7Q5T2T1 576 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ARHGAP11AQ6P4F7 1023 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ZNF449Q6P9G9 518 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ZNF790Q6PG37 636 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 PSRC1Q6PGN9 363 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 TMEM207Q6UWW9 146 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 DZIP1Q86YF9 867 aaKnown RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 KLHDC1Q8N7A1 406 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 DDHD1Q8NEL9 900 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 SEPT1Q8WYJ6 367 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TSACCQ96A04 125 aaPredicted RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 C4orf45Q96LM5 186 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 LITAFQ99732 161 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TUBB2BQ9BVA1 445 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ACTL8Q9H568 366 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 ATP13A3Q9H7F0 1226 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 MRGBPQ9NV56 204 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 DDX43Q9NXZ2 648 aaKnown RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 R4GN57 208 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 DISP3Q9P2K9 1392 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 TCF20Q9UGU0 1960 aaKnown RBP3.49□□□□□ -1.85
CD46-216ENST00000490278 A0A087WW49 117 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 MSGN1A6NI15 193 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 EDIL3O43854 480 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PRAF2O60831 178 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PAK4O96013 591 aaPredicted RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 PLGP00747 810 aaPredicted RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 RAF1P04049 648 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 SERPING1P05155 500 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 CASTP20810 708 aaKnown RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 NR0B1P51843 470 aaKnown RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 CRIP2P52943 208 aaPredicted RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 PTENP60484 403 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 CACNG1Q06432 222 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 RBBP7Q16576 425 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 TAZQ16635 292 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 CDO1Q16878 200 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 GPR33Q49SQ1 333 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 SUSD4Q5VX71 490 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 LYSMD4Q5XG99 296 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 TXNRD3NBQ6F5E7 133 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 NOTUMQ6P988 496 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 CTR9Q6PD62 1173 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 TMEM182Q6ZP80 229 aaPredicted RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 MSANTD1Q6ZTZ1 278 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PHLDB2Q86SQ0 1253 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 LSMEM2Q8N112 164 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 SIX6OS1Q8N1H7 587 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 OR7A2PQ8NGA2 310 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 GOT1L1Q8NHS2 421 aaPredicted RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 CORO2AQ92828 525 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 P2RX5Q93086 422 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 MR1Q95460 341 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 ST6GALNAC6Q969X2 333 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 EXOC4Q96A65 974 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PYCR2Q96C36 320 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 RBM4Q9BWF3 364 aaKnown RBP3.48□□□□□ -1.85
CD46-216ENST00000490278 THAP2Q9H0W7 228 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 SDCBP2Q9H190 292 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 LMAN1LQ9HAT1 526 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 ERAP1Q9NZ08 941 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 PKD2L2Q9NZM6 624 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 HEG1Q9ULI3 1381 aa3.48□□□□□ -1.85
CD46-216ENST00000490278 TRBV5-5A0A0J9YX44 114 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 C2CD4DB7Z1M9 353 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 FPGTO14772 594 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 PSMA7O14818 248 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 IFIT3O14879 490 aaKnown RBP3.47□□□□□ -1.85
CD46-216ENST00000490278 PPIP5K2O43314 1243 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 KRT86O43790 486 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 EXTL3O43909 919 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 FCGR3BO75015 233 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 SOCS5O75159 536 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 KHDRBS3O75525 346 aaKnown RBP3.47□□□□□ -1.85
CD46-216ENST00000490278 BAG3O95817 575 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 C9P02748 559 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 STAG3L1P0CL83 205 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 CEBPBP17676 345 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.85
CD46-216ENST00000490278 CETN2P41208 172 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 CDX1P47902 265 aaPredicted RBP3.47□□□□□ -1.85
CD46-216ENST00000490278 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
CD46-216ENST00000490278 MYL7Q01449 175 aa3.47□□□□□ -1.85
CD46-216ENST00000490278 SP3Q02447 781 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms