RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TMEM102Q8N9M5 508 aaPredicted RBP18.89■□□□□ 0.61
SMC4-222ENST00000490207 BBOF1Q8ND07 529 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 FBXO36Q8NEA4 188 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 FAM45AQ8TCE6 357 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 LINGO1Q96FE5 620 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 IP6K3Q96PC2 410 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 EPN3Q9H201 632 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 UTP6Q9NYH9 597 aaKnown RBP18.89■□□□□ 0.61
SMC4-222ENST00000490207 ADAMTS6Q9UKP5 1117 aa18.89■□□□□ 0.61
SMC4-222ENST00000490207 ANKRD12Q6UB98 2062 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 FAM187AA6NFU0 413 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 E7ESA3 106 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 PDGFAP04085 211 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 CASRP41180 1078 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 PGDP52209 483 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 FOXL2P58012 376 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 TBPL1P62380 186 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 ABATP80404 500 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 TLE1Q04724 770 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 PRDX1Q06830 199 aaKnown RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 FRG1Q14331 258 aaKnown RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 HECTD2Q5U5R9 776 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 ZNF425Q6IV72 752 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 COX15Q7KZN9 410 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 ADCK2Q7Z695 626 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 SPATA4Q8NEY3 305 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 MCOLN3Q8TDD5 553 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 DPH5Q9H2P9 285 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 CCDC177Q9NQR7 707 aaPredicted RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 ZFATQ9P243 1243 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 STOX2Q9P2F5 926 aaPredicted RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 PDE10AQ9Y233 779 aa18.88■□□□□ 0.61
SMC4-222ENST00000490207 PCDHGA9Q9Y5G4 932 aaKnown RBP18.88■□□□□ 0.61
SMC4-222ENST00000490207 TENM4Q6N022 2769 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 HYKKA2RU49 373 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 H0YGG7 62 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 RAD51CO43502 376 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 WISP1O95388 367 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 ONECUT2O95948 504 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 EZRP15311 586 aaKnown RBP18.87■□□□□ 0.61
SMC4-222ENST00000490207 FDXRP22570 491 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 ARF3P61204 181 aaPredicted RBP18.87■□□□□ 0.61
SMC4-222ENST00000490207 ETF1P62495 437 aaKnown RBP18.87■□□□□ 0.61
SMC4-222ENST00000490207 FBXO42Q6P3S6 717 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 SYT10Q6XYQ8 523 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 MBOAT1Q6ZNC8 495 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 ZBED8Q8IZ13 594 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 PTERQ96BW5 349 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 CCDC138Q96M89 665 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 OLFM1Q99784 485 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 WDR54Q9H977 334 aa18.87■□□□□ 0.61
SMC4-222ENST00000490207 CUEDC1Q9NWM3 386 aaPredicted RBP18.87■□□□□ 0.61
SMC4-222ENST00000490207 G3BP2Q9UN86 482 aaKnown RBP18.87■□□□□ 0.61
SMC4-222ENST00000490207 PEX12O00623 359 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 SLC16A5O15375 505 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 CEACAM4O75871 244 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 MED26O95402 600 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 ALBP02768 609 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 UMODP07911 640 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 OR1D4P47884 311 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 IL2P60568 153 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 MGAT5Q09328 741 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 CALCOCO2Q13137 446 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 MUM1Q2TAK8 710 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 COLEC12Q5KU26 742 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 PRAMEF13Q5VWM6 474 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 OVCH1Q7RTY7 1134 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 MAATS1Q7Z4T9 603 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 TMEM151BQ8IW70 566 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 DTWD1Q8N5C7 304 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 TEX19Q8NA77 164 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 CABS1Q96KC9 395 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 C10orf90Q96M02 699 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 ERP44Q9BS26 406 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 SLC26A1Q9H2B4 701 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 SYNPO2LQ9H987 977 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 PARVBQ9HBI1 364 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 WHRNQ9P202 907 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 CTSFQ9UBX1 484 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 MAU2Q9Y6X3 613 aa18.86■□□□□ 0.61
SMC4-222ENST00000490207 SPENQ96T58 3664 aaKnown RBP18.85■□□□□ 0.61
SMC4-222ENST00000490207 PABPN1LA6NDY0 278 aaKnown RBP18.85■□□□□ 0.61
SMC4-222ENST00000490207 HAT1O14929 419 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 ZIC2O95409 532 aaPredicted RBP18.85■□□□□ 0.61
SMC4-222ENST00000490207 TSPAN12O95859 305 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PGGT1BP53609 377 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 NKG7Q16617 165 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PHKG1Q16816 387 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PRTGQ2VWP7 1150 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PPP1R32Q7Z5V6 425 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 CSNK1A1LQ8N752 337 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 RERGQ96A58 199 aaPredicted RBP18.85■□□□□ 0.61
SMC4-222ENST00000490207 FER1L6-AS2Q96M78 137 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 SPSB2Q99619 263 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PCBD2Q9H0N5 130 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 ZNF304Q9HCX3 659 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 MLXIPLQ9NP71 852 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 NXT1Q9UKK6 140 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms