RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 C17orf64Q86WR6 236 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 PPP1R3BQ86XI6 285 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 FAM20CQ8IXL6 584 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 SNIP1Q8TAD8 396 aaKnown RBP16.75■□□□□ 0.27
ERCC3-207ENST00000490062 USP7Q93009 1102 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 PYCR2Q96C36 320 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 MED8Q96G25 268 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 ZIM3Q96PE6 472 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 OR6C1Q96RD1 312 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 ACAT2Q9BWD1 397 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 FANCEQ9HB96 536 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 CD274Q9NZQ7 290 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 XPR1Q9UBH6 696 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 RARRES3Q9UL19 164 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 PLCL2Q9UPR0 1127 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 KCNE2Q9Y6J6 123 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 AK5Q9Y6K8 562 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 AHCTF1Q8WYP5 2266 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 AKAP13Q12802 2813 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 SMIM23A6NLE4 172 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 STX16-NPEPL1H3BU86 382 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 STX16O14662 325 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 SRPX2O60687 465 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 PRAMEF10O60809 474 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 STK16O75716 305 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 S100BP04271 92 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 EZRP15311 586 aaKnown RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 GCGRP47871 477 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 NFKB2Q00653 900 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 MAP7Q14244 749 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 KCNAB1Q14722 419 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 THEMIS2Q5TEJ8 643 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 UNQ6494/PRO21346Q6UXR6 183 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 PKNOX2Q96KN3 472 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 CD244Q9BZW8 370 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 EHD1Q9H4M9 534 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 CCDC86Q9H6F5 360 aaKnown RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 APMAPQ9HDC9 416 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 WWOXQ9NZC7 414 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 TMEM216Q9P0N5 145 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 SENP1Q9P0U3 644 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 SLC22A14Q9Y267 594 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 TMEM184BQ9Y519 407 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 PCDHB3Q9Y5E6 796 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 TNPO3Q9Y5L0 923 aaKnown RBP16.74■□□□□ 0.27
ERCC3-207ENST00000490062 B3GALT1Q9Y5Z6 326 aa16.74■□□□□ 0.27
ERCC3-207ENST00000490062 KCNE1BA0A087WTH5 132 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 NCF1BA6NI72 391 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-207ENST00000490062 NCF1CA8MVU1 366 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-207ENST00000490062 SUPT3HB4E1H0 165 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 CTSVO60911 334 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 SUPT3HO75486 399 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 NCF1P14598 390 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-207ENST00000490062 SLC5A2P31639 672 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 CCT5P48643 541 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 MAPK10P53779 464 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 CSNK1G2P78368 415 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 FOXM1Q08050 763 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 CYP4F3Q08477 520 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 FBXO42Q6P3S6 717 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 SLC5A11Q8WWX8 675 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 PMEPA1Q969W9 287 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 ALKBH8Q96BT7 664 aaKnown RBP16.73■□□□□ 0.27
ERCC3-207ENST00000490062 THAP11Q96EK4 314 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 WDR34Q96EX3 536 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 PGM2Q96G03 612 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 LRFN5Q96NI6 719 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 ZFYVE21Q9BQ24 234 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 KLHL25Q9H0H3 589 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 PELI2Q9HAT8 420 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 DNAJC11Q9NVH1 559 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 CUEDC1Q9NWM3 386 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-207ENST00000490062 COPG2Q9UBF2 871 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 SERTAD3Q9UJW9 196 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 KLHL20Q9Y2M5 609 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 WDFY3Q8IZQ1 3526 aa16.73■□□□□ 0.27
ERCC3-207ENST00000490062 APC2O95996 2303 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 FITM1A5D6W6 292 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 GOLGA8RI6L899 631 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 TK2O00142 265 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 HCRTR1O43613 425 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 WDR47O94967 919 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 DLGAP3O95886 979 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 KRT4P19013 534 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 GNAZP19086 355 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 CASP2P42575 452 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 HSPA7P48741 367 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 EMP3P54852 163 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 ITGA1P56199 1179 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 CDC16Q13042 620 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 TSTA3Q13630 321 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-207ENST00000490062 GPR19Q15760 415 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 TCTE1Q5JU00 501 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 DTX1Q86Y01 620 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms