RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 C19orf47Q8N9M1 422 aaKnown RBP8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 SPC24Q8NBT2 197 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 OR4L1Q8NH43 312 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 OR5K2Q8NHB8 316 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 MAGEC3Q8TD91 643 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 DLG3Q92796 817 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 HDAC10Q969S8 669 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 FER1L6-AS2Q96M78 137 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 FOPNLQ96NB1 174 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 TRAPPC9Q96Q05 1148 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 NDC1Q9BTX1 674 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 RAB11FIP5Q9BXF6 653 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 PITPNM3Q9BZ71 974 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 EPN3Q9H201 632 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 CHST8Q9H2A9 424 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 BFARQ9NZS9 450 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 SLC39A10Q9ULF5 831 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 GUCA1BQ9UMX6 200 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 VPS4AQ9UN37 437 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 SRPK3Q9UPE1 567 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 REXO2Q9Y3B8 237 aaKnown RBP8.53□□□□□ -1.04
TNRC6B-208ENST00000489500 KALRNO60229 2985 aa8.52□□□□□ -1.04
TNRC6B-208ENST00000489500 ANKRD12Q6UB98 2062 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 A0A0J9YY10 115 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CCDC162PA2VCL2 907 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ARGFXA6NJG6 315 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CCL22O00626 93 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SGTAO43765 313 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 LIASO43766 372 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 NDUFS3O75489 264 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 OR2B3O76000 313 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 TMEM63AO94886 807 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SUN1O94901 812 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 FKBP9O95302 570 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ALPPP05187 535 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ST6GAL1P15907 406 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PDHA2P29803 388 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CA5AP35218 305 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 FOLR3P41439 243 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 NPY2RP49146 381 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CDKN1CP49918 316 aaPredicted RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ARSFP54793 590 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 GPS2Q13227 327 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 BRD3Q15059 726 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SLC5A12Q1EHB4 618 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ZC3H12BQ5HYM0 836 aaKnown RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PCID2Q5JVF3 399 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PLEKHS1Q5SXH7 462 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 TSTD2Q5T7W7 516 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PTRHD1Q6GMV3 140 aaKnown RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 RNF111Q6ZNA4 994 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 LRRC6Q86X45 466 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SLC13A5Q86YT5 568 aaPredicted RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SYTL1Q8IYJ3 562 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 MPP5Q8N3R9 675 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 LILRA3Q8N6C8 439 aaPredicted RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 OTUD6BQ8N6M0 293 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ENDOVQ8N8Q3 282 aaKnown RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PROKR1Q8TCW9 393 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 RNF31Q96EP0 1072 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 DESI2Q9BSY9 194 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CARD6Q9BX69 1037 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 AP1M1Q9BXS5 423 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 IL22Q9GZX6 179 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CHRNA10Q9GZZ6 450 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 ING2Q9H160 280 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 GCM1Q9NP62 436 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CATSPERZQ9NTU4 200 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 GNPTGQ9UJJ9 305 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 TCFL5Q9UL49 500 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 PLCL2Q9UPR0 1127 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 CCDC88CQ9P219 2028 aa8.52□□□□□ -1.05
TNRC6B-208ENST00000489500 SLC5A10A0PJK1 596 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 TMEM82A0PJX8 343 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 BTN3A3O00478 584 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 PRMT5O14744 637 aaPredicted RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 ZNF749O43361 778 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 IPO13O94829 963 aaKnown RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 GOT2P00505 430 aaKnown RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 CHRM5P08912 532 aaPredicted RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 CCDC175P0C221 793 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 UGT2B7P16662 529 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 PAMP19021 973 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 ITGAXP20702 1163 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 PSMA3P25788 255 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 FOXN2P32314 431 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 RAB28P51157 221 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 RPS18P62269 152 aaKnown RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 RNF4P78317 190 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 DCDP81605 110 aaKnown RBP8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 CDK16Q00536 496 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 HSPA14Q0VDF9 509 aa8.51□□□□□ -1.05
TNRC6B-208ENST00000489500 SNX1Q13596 522 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms