RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CBFBQ13951 182 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 LRRC32Q14392 662 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 XKR4Q5GH76 650 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 AQP11Q8NBQ7 271 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 DNAJA4Q8WW22 397 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 GEMIN6Q8WXD5 167 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 AUTS2Q8WXX7 1259 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 MIPEPQ99797 713 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SPATA7Q9P0W8 599 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF69Q9UC07 566 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 JUNP05412 331 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 RB1P06400 928 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SLC6A4P31645 630 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 MPIP34949 423 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 NUDT13Q86X67 352 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 HDDC3Q8N4P3 179 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 AASSQ9UDR5 926 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 A0A1W2PPW3 197 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 XPNPEP2O43895 674 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 RPP14O95059 124 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 EOMESO95936 686 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 FCER2P06734 321 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 PTNP21246 168 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 CCL14Q16627 93 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SPANXN4Q5MJ08 99 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 TRIM74Q86UV6 250 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 TRIM73Q86UV7 250 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 OSTM1Q86WC4 334 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 LNX2Q8N448 690 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 MINDY2Q8NBR6 621 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 LRRC15Q8TF66 581 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 HERVK_113Q902F9 699 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 C5orf51A6NDU8 294 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 INMTO95050 263 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 CDRT1O95170 752 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 PRH1P02810 166 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 H1F0P07305 194 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 GBX2P52951 348 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SLC3A1Q07837 685 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 PRRT2Q7Z6L0 340 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 THOC6Q86W42 341 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SLC30A8Q8IWU4 369 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 OR5T3Q8NGG3 340 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 SH3RF2Q8TEC5 729 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 MOCOSQ96EN8 888 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 P2RX2Q9UBL9 471 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 NRP1O14786 923 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ARCN1P48444 511 aaKnown RBP17.16■□□□□ 0.34
NPHP4-209ENST00000489180 HCAR3P49019 387 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 FBXL18Q96ME1 805 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 IL36AQ9UHA7 158 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ZSCAN5BA6NJL1 495 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 WNT9AO14904 365 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 SERPINA3P01011 423 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 EDNRAP25101 427 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 GPR33Q49SQ1 333 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 CYP27C1Q4G0S4 372 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 GDPD4Q6W3E5 623 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 QSOX2Q6ZRP7 698 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 LRRC70Q7Z2Q7 622 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 SLC22A15Q8IZD6 547 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 PREBQ9HCU5 417 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 MKKSQ9NPJ1 570 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 THUMPD1Q9NXG2 353 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 NDRG2Q9UN36 371 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 A0A1W2PP18 115 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 FGF3P11487 239 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 GJA1P17302 382 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 ECHS1P30084 290 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 C6orf183Q5T699 404 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 SLC15A3Q8IY34 581 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 KCTD13Q8WZ19 329 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 SCLYQ96I15 445 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 MND1Q9BWT6 205 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 RPF2Q9H7B2 306 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 M0QX08 132 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 AGTR2P50052 363 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 CBLBQ13191 982 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 PRAMEF14Q5SWL7 426 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 PRAMEF13Q5VWM6 474 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 C9orf43Q8TAL5 461 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 SEC14L1Q92503 715 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 FUBP3Q96I24 572 aaKnown RBP eCLIP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 CNDP2Q96KP4 475 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 YTHDF1Q9BYJ9 559 aaKnown RBP17.15■□□□□ 0.34
NPHP4-209ENST00000489180 USP29Q9HBJ7 922 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 TAC3Q9UHF0 121 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 FOXM1Q08050 763 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 NOGQ13253 232 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 TMEM236Q5W0B7 351 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 TOMM5Q8N4H5 51 aa17.15■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF676Q8N7Q3 588 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms