RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CDK19Q9BWU1 502 aa3.94□□□□□ -1.78
ITGB1-214ENST00000488427 RPS6KA6Q9UK32 745 aa3.94□□□□□ -1.78
ITGB1-214ENST00000488427 USP9XQ93008 2570 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-214ENST00000488427 STK36Q9NRP7 1315 aa3.94□□□□□ -1.78
ITGB1-214ENST00000488427 COL2A1P02458 1487 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-214ENST00000488427 IGHV4-61A0A0C4DH41 118 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SH2B2O14492 632 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-214ENST00000488427 KLF11O14901 512 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 ATP6V0E1O15342 81 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CGAP01215 116 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 IGHV4-59P01825 116 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SERPINB2P05120 415 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 HMBSP08397 361 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CFC1P0CG37 223 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CEACAM8P31997 349 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-214ENST00000488427 PRKAA1Q13131 559 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 GPR17Q13304 367 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CBWD6Q4V339 395 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CBWD3Q5JTY5 395 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 ELFN2Q5R3F8 820 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 GRTP1Q5TC63 336 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 FIGLAQ6QHK4 219 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 C15orf39Q6ZRI6 1047 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 TMPRSS11FQ6ZWK6 438 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 DDHD1Q8NEL9 900 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 CD99L2Q8TCZ2 262 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 MRGPRDQ8TDS7 321 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 HSD17B8Q92506 261 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 PTERQ96BW5 349 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SFXN2Q96NB2 322 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 TRIM51Q9BSJ1 452 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 C16orf70Q9BSU1 422 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 APOL6Q9BWW8 343 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 VN1R1Q9GZP7 353 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 DPAGT1Q9H3H5 408 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SIX2Q9NPC8 291 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SCRT2Q9NQ03 307 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 THEGQ9P2T0 379 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 RHCGQ9UBD6 479 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 PCDHGB4Q9UN71 923 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 KCNK7Q9Y2U2 307 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 USP24Q9UPU5 2620 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 SCN7AQ01118 1682 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 WDR81Q562E7 1941 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
ITGB1-214ENST00000488427 ZSWIM8A7E2V4 1837 aa3.93□□□□□ -1.78
ITGB1-214ENST00000488427 ASH1LQ9NR48 2969 aaKnown RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 DCHS1Q96JQ0 3298 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 TCRBV21S2A2A0A5A6 115 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 E9PI62 339 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 CREG1O75629 220 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 APOHP02749 345 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PFKFB1P16118 471 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 EEF1B2P24534 225 aaKnown RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 CDR2Q01850 454 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 TRIM65Q6PJ69 517 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PRPF39Q86UA1 669 aaKnown RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 AACSQ86V21 672 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 MARVELD2Q8N4S9 558 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 OR2AJ1Q8NGZ0 328 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 TAS1R2Q8TE23 839 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PIGBQ92521 554 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 TMCO6Q96DC7 493 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 MTMR12Q9C0I1 747 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 FAM49AQ9H0Q0 323 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PPIL3Q9H2H8 161 aaKnown RBP3.92□□□□□ -1.78
ITGB1-214ENST00000488427 OPA3Q9H6K4 179 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PDE7BQ9NP56 450 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 EQTNQ9NQ60 294 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 GKN1Q9NS71 199 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 FGF21Q9NSA1 209 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PCDH11XQ9BZA7 1347 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 PCDH11YQ9BZA8 1340 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 CD163L1Q9NR16 1453 aa3.92□□□□□ -1.78
ITGB1-214ENST00000488427 KDRP35968 1356 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 COL4A5P29400 1685 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 LOC101059948A0A1B0GTJ6 334 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 hCG_1809904A0A1W2PP81 198 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 A0A1W2PPE2 198 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 A0A1W2PR64 198 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 SSC5DA1L4H1 1573 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 SMCHD1A6NHR9 2005 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ADAMDEC1O15204 470 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ZG16O60844 167 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 BCL10O95999 233 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 LINGO3P0C6S8 592 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ACP2P11117 423 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 GNB3P16520 340 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ALDH4A1P30038 563 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 GABRA5P31644 462 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ACTN2P35609 894 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 PNRC1Q12796 327 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-214ENST00000488427 PRPF4BQ13523 1007 aaKnown RBP3.91□□□□□ -1.78
ITGB1-214ENST00000488427 TUBB2AQ13885 445 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 PDLIM3Q53GG5 364 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-214ENST00000488427 ARHGAP17Q68EM7 881 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 TMEM211Q6ICI0 200 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms