RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RBPJQ06330 500 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 FASTKQ14296 549 aaKnown RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 SYT16Q17RD7 645 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 MUM1Q2TAK8 710 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 HKDC1Q2TB90 917 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 VSTM4Q8IW00 320 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 SIAH3Q8IW03 269 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 MDS2Q8NDY4 140 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 THAP3Q8WTV1 239 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ASZ1Q8WWH4 475 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ALG3Q92685 438 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 HDAC10Q969S8 669 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 GPR137Q96N19 417 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 SIGLEC12Q96PQ1 595 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ZFYVE21Q9BQ24 234 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 RAB11FIP5Q9BXF6 653 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 C14orf105Q9NVL8 296 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ZNHIT6Q9NWK9 470 aaKnown RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 TRPC4Q9UBN4 977 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 SLC39A10Q9ULF5 831 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ASPDHA6ND91 283 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 ADAM10O14672 748 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 TLE4Q04727 773 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 ZNF33BQ06732 778 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 ZNF766Q5HY98 468 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 AFTPHQ6ULP2 937 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 LDB1Q86U70 411 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-228ENST00000487354 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 OR52K1Q8NGK4 314 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 MVB12AQ96EY5 273 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 CABS1Q96KC9 395 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 FERMT1Q9BQL6 677 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 TMEM121Q9BTD3 319 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 TSPAN10Q9H1Z9 355 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-228ENST00000487354 MCCC2Q9HCC0 563 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 MARCH4Q9P2E8 410 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-228ENST00000487354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
MCF2L-228ENST00000487354 PCDHA3Q9Y5H8 950 aa14.55□□□□□ -0.08
MCF2L-228ENST00000487354 INTS1Q8N201 2190 aaKnown RBP14.54□□□□□ -0.08
MCF2L-228ENST00000487354 IGHV3-20A0A0C4DH32 117 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 P2RX6O15547 441 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 MAN1A2O60476 641 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 DIAPH2O60879 1101 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 ERGP11308 486 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 CXCR2P25025 360 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 ST13P50502 369 aaKnown RBP14.54□□□□□ -0.08
MCF2L-228ENST00000487354 SMSP52788 366 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 TSTD2Q5T7W7 516 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 ABHD17BQ5VST6 288 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 H3F3CQ6NXT2 135 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 LANCL3Q6ZV70 420 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 FGD2Q7Z6J4 655 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 PAQR7Q86WK9 346 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 SPPL2CQ8IUH8 684 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 BEST3Q8N1M1 668 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 TAB3Q8N5C8 712 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-228ENST00000487354 SCMH1Q96GD3 660 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 FRMD6Q96NE9 622 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 DMRTA2Q96SC8 542 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 DPH7Q9BTV6 452 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 MKKSQ9NPJ1 570 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-228ENST00000487354 STMN3Q9NZ72 180 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 PCDHGB6Q9Y5F9 930 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 SCN3AQ9NY46 2000 aa14.54□□□□□ -0.08
MCF2L-228ENST00000487354 ANKHD1Q8IWZ3 2542 aaKnown RBP14.53□□□□□ -0.08
MCF2L-228ENST00000487354 GOLGA6L19H0YKK7 550 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 APOA4P06727 396 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 HEXBP07686 556 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 ESRRAP11474 423 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-228ENST00000487354 IGFBP2P18065 325 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 CTNNA2P26232 953 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 GRIA1P42261 906 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 MAGEA1P43355 309 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 CASP6P55212 293 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 CSNK1G2P78368 415 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 MAT1AQ00266 395 aaKnown RBP14.53□□□□□ -0.08
MCF2L-228ENST00000487354 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.53□□□□□ -0.08
MCF2L-228ENST00000487354 FCRLBQ6BAA4 426 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 TUBA3EQ6PEY2 450 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 CEP97Q8IW35 865 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 CSNK1A1LQ8N752 337 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 OR4L1Q8NH43 312 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 RAD51AP1Q96B01 352 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 MAGED4Q96JG8 741 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 OR2A5Q96R48 311 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 PLCD4Q9BRC7 762 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 TRIM51Q9BSJ1 452 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 TUBB6Q9BUF5 446 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 P2RY12Q9H244 342 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 RIMKLBQ9ULI2 386 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 NEU2Q9Y3R4 380 aa14.53□□□□□ -0.08
MCF2L-228ENST00000487354 PRRC2AP48634 2157 aaKnown RBP14.52□□□□□ -0.08
MCF2L-228ENST00000487354 A0A0A6YYC8 382 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 RCCD1A6NED2 376 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 I3L1I5 382 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 SEC24DO94855 1032 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms