RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NOBOXO60393 691 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 PRMT3O60678 531 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 GSTM1P09488 218 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 IL7RP16871 459 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 MAP4P27816 1152 aaKnown RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 MAPK9P45984 424 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TRPC1P48995 793 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TPD52P55327 224 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 GSTM4Q03013 218 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 LAPTM5Q13571 262 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 C16orf72Q14CZ0 275 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 CTU2Q2VPK5 515 aaKnown RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TMEM215Q68D42 235 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 SHQ1Q6PI26 577 aaKnown RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 Q6ZVL8 140 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 DPPA4Q7L190 304 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TMEM179BQ7Z7N9 219 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 DCP2Q8IU60 420 aaKnown RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TMEFF2Q9UIK5 374 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 PSME2Q9UL46 239 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 SLC22A14Q9Y267 594 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 SGTAO43765 313 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 CCNDBP1O95273 360 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 CD247P20963 164 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 ABRQ12979 859 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 DPY19L1Q2PZI1 675 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 ZNF805Q5CZA5 627 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 LAIR2Q6ISS4 152 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 SERPINA11Q86U17 422 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 HS3ST5Q8IZT8 346 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 CSGALNACT1Q8TDX6 532 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 BTN2A2Q8WVV5 523 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TANKQ92844 425 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 HSPBAP1Q96EW2 488 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 VPS35Q96QK1 796 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 INPP5KQ9BT40 448 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 PALMDQ9NP74 551 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 TBC1D23Q9NUY8 699 aa25.32■■□□□ 1.64
HLA-C-208ENST00000487245 SAMD4AQ9UPU9 718 aaKnown RBP25.32■■□□□ 1.64
HLA-C-208ENST00000487245 XYLBO75191 536 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 RFPL2O75678 378 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 SRPRAP08240 638 aaKnown RBP25.31■■□□□ 1.64
HLA-C-208ENST00000487245 HTR1AP08908 422 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 HNRNPA1P09651 372 aaKnown RBP eCLIP25.31■■□□□ 1.64
HLA-C-208ENST00000487245 CCDC159P0C7I6 412 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 HALP42357 657 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 GJA8P48165 433 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 CSTF3Q12996 717 aaKnown RBP25.31■■□□□ 1.64
HLA-C-208ENST00000487245 MEP1AQ16819 746 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 RBM23Q86U06 439 aaKnown RBP25.31■■□□□ 1.64
HLA-C-208ENST00000487245 C10orf111Q8N326 155 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 ARL10Q8N8L6 244 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 MUL1Q969V5 352 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 RIOK2Q9BVS4 552 aaKnown RBP25.31■■□□□ 1.64
HLA-C-208ENST00000487245 FAIMQ9NVQ4 179 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 ORC6Q9Y5N6 252 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 PLXNA2O75051 1894 aa25.31■■□□□ 1.64
HLA-C-208ENST00000487245 TTC34A8MYJ7 566 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 HS6ST1O60243 411 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 AMD1P17707 334 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 ITIH1P19827 911 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 PFN3P60673 137 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 VAC14Q08AM6 782 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 CHIT1Q13231 466 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 TBC1D25Q3MII6 688 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 CES5AQ6NT32 575 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 RAVER1Q8IY67 606 aaKnown RBP25.3■■□□□ 1.64
HLA-C-208ENST00000487245 KLHDC8AQ8IYD2 350 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 NELL1Q92832 810 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 FBXO10Q9UK96 956 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 MTX2O75431 263 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 E2F6O75461 281 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 PSIP1O75475 530 aaKnown RBP25.3■■□□□ 1.64
HLA-C-208ENST00000487245 FGBP02675 491 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 BMPR1AP36894 532 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 ETV3P41162 512 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 NEK2P51955 445 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 TECPR1Q7Z6L1 1165 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 NRSN1Q8IZ57 195 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 MIPOL1Q8TD10 442 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 WFIKKN2Q8TEU8 576 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 CYB5D2Q8WUJ1 264 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 PYCR2Q96C36 320 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 METTL2AQ96IZ6 378 aaKnown RBP25.3■■□□□ 1.64
HLA-C-208ENST00000487245 CCDC138Q96M89 665 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 TSSK3Q96PN8 268 aa25.3■■□□□ 1.64
HLA-C-208ENST00000487245 TRIT1Q9H3H1 467 aaKnown RBP25.3■■□□□ 1.64
HLA-C-208ENST00000487245 SYN1P17600 705 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 PRPS1L1P21108 318 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 TACR1P25103 407 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 PLA2G16P53816 162 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 C21orf58P58505 322 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 IRF8Q02556 426 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 SYTL3Q4VX76 610 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 CPZQ66K79 652 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 CYP2U1Q7Z449 544 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 GLMNQ92990 594 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 PCDHGB1Q9Y5G3 927 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 WNT6Q9Y6F9 365 aa25.29■■□□□ 1.64
HLA-C-208ENST00000487245 HSPE1-MOB4S4R3N1 261 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms