RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MED26O95402 600 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 SYF2O95926 243 aaKnown RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 ALPPP05187 535 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 EIF2S1P05198 315 aaKnown RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 ERVK-10P10266 1014 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 ARF3P61204 181 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 AIMP2Q13155 320 aaKnown RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 TSTA3Q13630 321 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 UBAP2LQ14157 1087 aaKnown RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 MSS51Q4VC12 460 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CLEC18BQ6UXF7 455 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 KIAA0408Q6ZU52 694 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 UBE2R2Q712K3 238 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CNTN4Q8IWV2 1026 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 EFCAB3Q8N7B9 438 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CLEC18CQ8NCF0 446 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CPT1CQ8TCG5 803 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 PNPLA2Q96AD5 504 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 RUNDC3BQ96NL0 473 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 ZNF552Q9H707 407 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 SEMA3GQ9NS98 782 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 TAS2R13Q9NYV9 303 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 TRMT6Q9UJA5 497 aaKnown RBP18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CDC23Q9UJX2 597 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 MAP4K5Q9Y4K4 846 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 PTPN13Q12923 2485 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 HECTD1Q9ULT8 2610 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 RELNP78509 3460 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 SMAPO00193 183 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 EZRP15311 586 aaKnown RBP18.21■□□□□ 0.51
CLIP2-206ENST00000487091 VARSP26640 1264 aaKnown RBP18.21■□□□□ 0.51
CLIP2-206ENST00000487091 RAPSNQ13702 412 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 MORF4L2Q15014 288 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 GARNL3Q5VVW2 1013 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 SLC6A19Q695T7 634 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 IGFL3Q6UXB1 125 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 GALNT7Q86SF2 657 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 CREG2Q8IUH2 290 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 LRRC56Q8IYG6 542 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-206ENST00000487091 METTL27Q8N6F8 245 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-206ENST00000487091 GALNT11Q8NCW6 608 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 PPFIBP2Q8ND30 876 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 COL26A1Q96A83 441 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 MVB12AQ96EY5 273 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 VPS50Q96JG6 964 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 C10orf90Q96M02 699 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 OR2A5Q96R48 311 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 SLAMF7Q9NQ25 335 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 CTSFQ9UBX1 484 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 CDC14AQ9UNH5 594 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 HS3ST3B1Q9Y662 390 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 MAU2Q9Y6X3 613 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 DOCK10Q96BY6 2186 aa18.21■□□□□ 0.51
CLIP2-206ENST00000487091 COL12A1Q99715 3063 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 SHANK1Q9Y566 2161 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 USP27XA6NNY8 438 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 TXNDC9O14530 226 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 SOCS6O14544 535 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 VPS4BO75351 444 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 GABRB3P28472 473 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 IMPA1P29218 277 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 RGS4P49798 205 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 TIAL1Q01085 375 aaKnown RBP eCLIP18.2■□□□□ 0.5
CLIP2-206ENST00000487091 OCA2Q04671 838 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 BBS9Q3SYG4 887 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 PIWIL4Q7Z3Z4 852 aaKnown RBP18.2■□□□□ 0.5
CLIP2-206ENST00000487091 SPNS2Q8IVW8 549 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 PDIK1LQ8N165 341 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 DTWD1Q8N5C7 304 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 CSNK1A1LQ8N752 337 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 Q8NA96 180 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 STT3BQ8TCJ2 826 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 MCOLN3Q8TDD5 553 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 RERGQ96A58 199 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-206ENST00000487091 CABS1Q96KC9 395 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 NDNQ99608 321 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 MFRPQ9BY79 579 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-206ENST00000487091 ZNF282Q9UDV7 671 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-206ENST00000487091 FBXL4Q9UKA2 621 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 VPS4AQ9UN37 437 aa18.2■□□□□ 0.5
CLIP2-206ENST00000487091 IGLV3-12A0A075B6K2 115 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 BANF1O75531 89 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 AHSGP02765 367 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 C8GP07360 202 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 ZGLP1P0C6A0 271 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 HRH2P25021 359 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 CARSP49589 748 aaKnown RBP18.19■□□□□ 0.5
CLIP2-206ENST00000487091 GNG11P61952 73 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 INPP5JQ15735 1006 aaPredicted RBP18.19■□□□□ 0.5
CLIP2-206ENST00000487091 RBBP7Q16576 425 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 THEMIS2Q5TEJ8 643 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 PRAMEF13Q5VWM6 474 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 KIRREL2Q6UWL6 708 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 IGDCC3Q8IVU1 814 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 EEF1AKMT1Q8WVE0 214 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 TM9SF4Q92544 642 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 ANP32BQ92688 251 aaKnown RBP18.19■□□□□ 0.5
CLIP2-206ENST00000487091 MIEF2Q96C03 454 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms