RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
HDAC3-209ENST00000486618 CAMK2AQ9UQM7 478 aa6.64□□□□□ -1.35
HDAC3-209ENST00000486618 CBY1Q9Y3M2 126 aa6.64□□□□□ -1.35
HDAC3-209ENST00000486618 IGHV1OR21-1A0A087WYE8 117 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 GOLGA6L10A6NI86 522 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 H0YAE9 185 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PDLIM1O00151 329 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 INPP4BO15327 924 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TEX33O43247 280 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PIGNO95427 931 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PRKCGP05129 697 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 GSNP06396 782 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ELFN1P0C7U0 828 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 GALP22466 123 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 GNLYP22749 145 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NFKBIAP25963 317 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TLX1P31314 330 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MMP12P39900 470 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ZNF41P51814 821 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ARHGDIBP52566 201 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 RAD23AP54725 363 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 POLR2LP62875 67 aaKnown RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TPM4P67936 248 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MC2RQ01718 297 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MAP4K2Q12851 820 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 RPA4Q13156 261 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PFKFB4Q16877 469 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NDUFAF5Q5TEU4 345 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MANEALQ5VSG8 457 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NKAIN2Q5VXU1 208 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 SHEQ5VZ18 495 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 KCTD16Q68DU8 428 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TTI2Q6NXR4 508 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 JMJD6Q6NYC1 403 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PNCKQ6P2M8 343 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 GJB7Q6PEY0 223 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ARCQ7LC44 396 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NLRP9Q7RTR0 991 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MAMDC2Q7Z304 686 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 XYLT1Q86Y38 959 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 KIF18BQ86Y91 864 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 UNC5BQ8IZJ1 945 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TAGAPQ8N103 731 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 OR10G6Q8NH81 332 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PPP1R35Q8TAP8 253 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NELFBQ8WX92 580 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 FAM168AQ92567 244 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 LRRC39Q96DD0 335 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 RTP4Q96DX8 246 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ADAD1Q96M93 576 aaKnown RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 CFAP57Q96MR6 1250 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 DPH2Q9BQC3 489 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 THUMPD3Q9BV44 507 aaKnown RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 SPRY4Q9C004 299 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ISCUQ9H1K1 167 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 FBXO8Q9NRD0 319 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 PHPT1Q9NRX4 125 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 FAM114A2Q9NRY5 505 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 SLC35D1Q9NTN3 355 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 NINJ2Q9NZG7 142 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TAAR2Q9P1P5 351 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 DLGAP4Q9Y2H0 992 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 KLHL20Q9Y2M5 609 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 TMEM184BQ9Y519 407 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 CAPN6Q9Y6Q1 641 aa6.63□□□□□ -1.35
HDAC3-209ENST00000486618 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
HDAC3-209ENST00000486618 H3BML4 177 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 H3BS24 57 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 PPM1DO15297 605 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 INSIG1O15503 277 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 PRODHO43272 600 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 STK17BO94768 372 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 ABCB1P08183 1280 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-209ENST00000486618 PLEKP08567 350 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SLC9A1P19634 815 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CCNA2P20248 432 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SERPINA4P29622 427 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SDC4P31431 198 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CDH5P33151 784 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-209ENST00000486618 BMI1P35226 326 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 UQCRFS1P47985 274 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CSNK1DP48730 415 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 ALDH9A1P49189 494 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 ALDH18A1P54886 795 aaKnown RBP6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CARD18P57730 90 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 ACOX1Q15067 660 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 NCF4Q15080 339 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 KYNUQ16719 465 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 EXOC3L4Q17RC7 722 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CLEC16AQ2KHT3 1053 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 PARP15Q460N3 678 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 TCP11X2Q5H9J9 407 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 CDKAL1Q5VV42 579 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 AFMIDQ63HM1 303 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SLC25A24Q6NUK1 477 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 SLC30A9Q6PML9 568 aa6.62□□□□□ -1.35
HDAC3-209ENST00000486618 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms