RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZNF571Q7Z3V5 609 aaPredicted RBP14.32□□□□□ -0.12
U2AF1-211ENST00000486519 NIPA2Q8N8Q9 360 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 NEK11Q8NG66 645 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 OR13C4Q8NGS5 318 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 PLSCR2Q9NRY7 297 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.32□□□□□ -0.12
U2AF1-211ENST00000486519 HEY1Q9Y5J3 304 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 PRSS21Q9Y6M0 314 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 SCINQ9Y6U3 715 aa14.32□□□□□ -0.12
U2AF1-211ENST00000486519 EML6Q6ZMW3 1958 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 KIAA1549Q9HCM3 1950 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 A0A0A6YYK5 440 aaPredicted RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 C8orf89P0DMQ9 161 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 NFKB1P19838 968 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 PTPN3P26045 913 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 SLC26A3P40879 764 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 KRTAP1-1Q07627 177 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 PIGHQ14442 188 aaPredicted RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 PRTGQ2VWP7 1150 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 HMBOX1Q6NT76 420 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 CPEB2Q7Z5Q1 589 aaKnown RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 WDR53Q7Z5U6 358 aaPredicted RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 COPS8Q99627 209 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 TTYH2Q9BSA4 534 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 C14orf105Q9NVL8 296 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
U2AF1-211ENST00000486519 SCN3AQ9NY46 2000 aa14.31□□□□□ -0.12
U2AF1-211ENST00000486519 IGLV3-16A0A075B6K0 115 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 A0A0U1RQJ8 604 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 FOXS1O43638 330 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 AP2A1O95782 977 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 FERP16591 822 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 UQCRC1P31930 480 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 ZFP36L2P47974 494 aaKnown RBP14.3□□□□□ -0.12
U2AF1-211ENST00000486519 FIGNQ5HY92 759 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 SULF2Q8IWU5 870 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 KCTD6Q8NC69 237 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 IPMKQ8NFU5 416 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 TGIF2Q9GZN2 237 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 DEFB127Q9H1M4 99 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 CDCP1Q9H5V8 836 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 HACD3Q9P035 362 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 FAM153AQ9UHL3 310 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 POLG2Q9UHN1 485 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 HEATR5BQ9P2D3 2071 aa14.3□□□□□ -0.12
U2AF1-211ENST00000486519 NPIPA2E9PIF3 369 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 NPIPA3F8WFD2 350 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 RALBP11234 206 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 TACR1P25103 407 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
U2AF1-211ENST00000486519 AP2B1P63010 937 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 POU4F3Q15319 338 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
U2AF1-211ENST00000486519 MUM1Q2TAK8 710 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 HKDC1Q2TB90 917 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 GXYLT1Q4G148 440 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 TEX44Q53QW1 395 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 ULK2Q8IYT8 1036 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 KIF2BQ8N4N8 673 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 ARHGEF39Q8N4T4 335 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 RELL2Q8NC24 303 aaPredicted RBP14.29□□□□□ -0.12
U2AF1-211ENST00000486519 MMABQ96EY8 250 aaPredicted RBP14.29□□□□□ -0.12
U2AF1-211ENST00000486519 CABS1Q96KC9 395 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 TEKT5Q96M29 485 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 SLC6A16Q9GZN6 736 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 HAUS4Q9H6D7 363 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 RUVBL1Q9Y265 456 aaKnown RBP14.29□□□□□ -0.12
U2AF1-211ENST00000486519 ALG6Q9Y672 507 aa14.29□□□□□ -0.12
U2AF1-211ENST00000486519 A0A0A6YYC8 382 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 I3L1I5 382 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 PRMT3O60678 531 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 SRPX2O60687 465 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 SUN1O94901 812 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 F12P00748 615 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 AGTP01019 485 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 CDK11BP21127 795 aaKnown RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 CD9P21926 228 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 WASHC5Q12768 1159 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 MESDQ14696 234 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 DAZAP2Q15038 168 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 RNF44Q7L0R7 432 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 VRK3Q8IV63 474 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 FAM222BQ8WU58 562 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 RNF157Q96PX1 679 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 CYTH2Q99418 400 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 MIPEPQ99797 713 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 PLCD4Q9BRC7 762 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 FICDQ9BVA6 458 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms