RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 TTC30BQ8N4P2 665 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 LRRC8CQ8TDW0 803 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 RMDN1Q96DB5 314 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 SFXN2Q96NB2 322 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 NODALQ96S42 347 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 SEPHS2Q99611 448 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 BAG1Q99933 345 aaPredicted RBP5.57□□□□□ -1.52
RTN4-214ENST00000486085 BTBD10Q9BSF8 475 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 MMP28Q9H239 520 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 PIH1D3Q9NQM4 214 aaKnown RBP5.57□□□□□ -1.52
RTN4-214ENST00000486085 OSGIN1Q9UJX0 560 aa5.57□□□□□ -1.52
RTN4-214ENST00000486085 SLX4Q8IY92 1834 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 A0A1W2PRB8 838 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 TMEM221A6NGB7 291 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 PRR32B1ATL7 298 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 SURF6O75683 361 aaKnown RBP5.56□□□□□ -1.52
RTN4-214ENST00000486085 DANCRP0C864 163 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 FKBP1AP62942 108 aaKnown RBP5.56□□□□□ -1.52
RTN4-214ENST00000486085 PHEXP78562 749 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 DMPKQ09013 629 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 KLHL26Q53HC5 615 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 TCP11X2Q5H9J9 407 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 FAM198BQ6UWH4 519 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 CENPVQ7Z7K6 275 aaPredicted RBP5.56□□□□□ -1.52
RTN4-214ENST00000486085 CFAP206Q8IYR0 622 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 ARHGAP24Q8N264 748 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 DNAJC22Q8N4W6 341 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 SLC4A11Q8NBS3 891 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 PPFIBP2Q8ND30 876 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 OR2T12Q8NG77 320 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 VPS33AQ96AX1 596 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
RTN4-214ENST00000486085 SGK494Q96LW2 274 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 VN1R1Q9GZP7 353 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 SLC7A7Q9UM01 511 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 PADI2Q9Y2J8 665 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 NME7Q9Y5B8 376 aa5.56□□□□□ -1.52
RTN4-214ENST00000486085 PSME4Q14997 1843 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 SALL1Q9NSC2 1324 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 A0A1W2PPM1 405 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 FAM172BPA6NC97 362 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 DUXAA6NLW8 204 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 A8MXE2 369 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 E9PI62 339 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 DPEP1P16444 411 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 GNAZP19086 355 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 PCGF2P35227 344 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 MTHFRP42898 656 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 NR2C2P49116 596 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 RAB28P51157 221 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 CDH11P55287 796 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 CAMK2DQ13557 499 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 VWC2Q2TAL6 325 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 CCNYL2Q5T2Q4 361 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 ARMC4Q5T2S8 1044 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 RBPMS2Q6ZRY4 209 aaKnown RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 TRMT1LQ7Z2T5 733 aaKnown RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 PLD3Q8IV08 490 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 FOXP4Q8IVH2 680 aaPredicted RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 HDAC11Q96DB2 347 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 MYADMQ96S97 322 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 AP1M1Q9BXS5 423 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 PUS3Q9BZE2 481 aaKnown RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 ZNF334Q9HCZ1 680 aaPredicted RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 B3GAT1Q9P2W7 334 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 PA2G4Q9UQ80 394 aaKnown RBP5.55□□□□□ -1.52
RTN4-214ENST00000486085 EXOC6BQ9Y2D4 811 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 CCL27Q9Y4X3 112 aa5.55□□□□□ -1.52
RTN4-214ENST00000486085 AKAP11Q9UKA4 1901 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 FLT1P17948 1338 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 FAM205AQ6ZU69 1335 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 ZNF646O15015 1829 aaPredicted RBP5.54□□□□□ -1.52
RTN4-214ENST00000486085 A0A1B0GUL7 405 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 TRIM77I1YAP6 450 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 SLC22A3O75751 556 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 CELF2O95319 508 aaKnown RBP5.54□□□□□ -1.52
RTN4-214ENST00000486085 CAVIN2O95810 425 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 UQCRFS1P1P0C7P4 283 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 FGF5P12034 268 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 DCTP40126 519 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 CX3CL1P78423 397 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 TFCP2Q12800 502 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 PTPRCAPQ14761 206 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 TECRLQ5HYJ1 363 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 CST9LP1Q5W188 147 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 KRT39Q6A163 491 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 SLC27A1Q6PCB7 646 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 LINGO4Q6UY18 593 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 ZBTB49Q6ZSB9 765 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 TMPRSS11BQ86T26 416 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 GPATCH11Q8N954 259 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 TRIML1Q8N9V2 468 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 XXYLT1Q8NBI6 393 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 KLHDC9Q8NEP7 349 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 OR13J1Q8NGT2 312 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 FGFBP3Q8TAT2 258 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 MRPS27Q92552 414 aaKnown RBP5.54□□□□□ -1.52
RTN4-214ENST00000486085 ZNF653Q96CK0 615 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 CFAP57Q96MR6 1250 aa5.54□□□□□ -1.52
RTN4-214ENST00000486085 RTP3Q9BQQ7 232 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms