RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DCDP81605 110 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 GALNT3Q14435 633 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 PCOLCEQ15113 449 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 TUBB8Q3ZCM7 444 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ALS2CLQ60I27 953 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ISM2Q6H9L7 571 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 RHBDD2Q6NTF9 364 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 DPY19L2P1Q6NXN4 242 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 KIRREL2Q6UWL6 708 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 Q6ZPB1 254 aaPredicted RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 TRAPPC5Q8IUR0 188 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 PALM2Q8IXS6 379 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 C3orf20Q8ND61 904 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 SLC30A5Q8TAD4 765 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 Q8TCH9 128 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 TEKT4Q8WW24 435 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 NACC2Q96BF6 587 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 THOC3Q96J01 351 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 MAGED4Q96JG8 741 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 EIF3CQ99613 913 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ZNF559Q9BR84 538 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ZNF747Q9BV97 191 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 SELENOOQ9BVL4 669 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 AP1M1Q9BXS5 423 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 TDRD1Q9BXT4 1180 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 SEC61A2Q9H9S3 476 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 NT5MQ9NPB1 228 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 SLC22A11Q9NSA0 550 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 IMP3Q9NV31 184 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 NFKBIL1Q9UBC1 381 aaPredicted RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 SLC24A2Q9UI40 661 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 NOCTQ9UK39 431 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 MAN1B1Q9UKM7 699 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 PSMD13Q9UNM6 376 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 CFAP20Q9Y6A4 193 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 PHF3Q92576 2039 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 SCN2AQ99250 2005 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 C17orf113A0A1B0GUU1 675 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 TCRBV5S1A1TA0A578 114 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 DYTNA2CJ06 578 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 SIGLEC16A6NMB1 481 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 DAPK3O43293 454 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PMPCBO75439 489 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 CDK14O94921 469 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 SLCO2B1O94956 709 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 RASAL1O95294 804 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 IL18BPO95998 194 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 HEXAP06865 529 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 ENO2P09104 434 aaPredicted RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 PVRP15151 417 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 HLA-DPA1P20036 260 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 UGT1A4P22310 534 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 GDF5P43026 501 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 RPL26P61254 145 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 RPL7AP62424 266 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 PMP22Q01453 160 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 FMO1Q01740 532 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 DMPKQ09013 629 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 DPYSQ14117 519 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 NKAIN1Q4KMZ8 207 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 ANKRD20A8PQ5CZ79 823 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 MARC1Q5VT66 337 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PDPK2PQ6A1A2 396 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 CLEC9AQ6UXN8 241 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 FAM83HQ6ZRV2 1179 aaPredicted RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 CDHR3Q6ZTQ4 885 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 GPR135Q8IZ08 494 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 STPG3Q8N7X2 389 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 GPR26Q8NDV2 337 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 LPCAT1Q8NF37 534 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMC4-217ENST00000485867 CCHCR1Q8TD31 782 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 CA5BP1Q8WTZ4 195 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PHF10Q8WUB8 498 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 ZFPM2Q8WW38 1151 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 SDCCAG3Q96C92 435 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 EID2BQ96D98 161 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 C18orf12Q96KH6 178 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 MCEEQ96PE7 176 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PEBP4Q96S96 227 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 CNPY3Q9BT09 278 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 ZSCAN5AQ9BUG6 496 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 SNRNP25Q9BV90 132 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 NUP85Q9BW27 656 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 PITPNM3Q9BZ71 974 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 VPS16Q9H269 839 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 KIR3DX1Q9H7L2 352 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 DHCR7Q9UBM7 475 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 KCNN3Q9UGI6 736 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 TMPRSS11EQ9UL52 423 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 RPL26L1Q9UNX3 145 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 TCAF1Q9Y4C2 921 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 AP1M2Q9Y6Q5 423 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 ARID1AO14497 2285 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms