RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PCBD2Q9H0N5 130 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 ZNF358Q9NW07 568 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 EURLQ9NYK6 297 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 NUDT4Q9NZJ9 180 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 FETUBQ9UGM5 382 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 SERTAD3Q9UJW9 196 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 AHCTF1Q8WYP5 2266 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 TARM1B6A8C7 271 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 E7EQ34 232 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 H7BY64 318 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 UBXN8O00124 270 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 HAT1O14929 419 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 KERAO60938 352 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 RFPL1O75677 317 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 WDR47O94967 919 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 DLGAP3O95886 979 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 NTRK1P04629 796 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 MSL3P1P0C860 447 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 GDF5P43026 501 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 KCNC1P48547 511 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 HNMTP50135 292 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 VSX2P58304 361 aaPredicted RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 IFFO1Q0D2I5 559 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CLN3Q13286 438 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 ACAP2Q15057 778 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 SULT1C3Q6IMI6 304 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 TIPARPQ7Z3E1 657 aaKnown RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 ISCA2Q86U28 154 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 VASH2Q86V25 355 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 THOC6Q86W42 341 aaKnown RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 PLD3Q8IV08 490 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 MCATQ8IVS2 390 aaKnown RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 SPACA3Q8IXA5 215 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 NLGN4XQ8N0W4 816 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 NLGN4YQ8NFZ3 816 aaPredicted RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CABS1Q96KC9 395 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 PRAP1Q96NZ9 151 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 SELENOSQ9BQE4 189 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 PLCD4Q9BRC7 762 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 TMEM79Q9BSE2 394 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 HAUS8Q9BT25 410 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 SLC7A5P2Q9GIP4 190 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CHRNA10Q9GZZ6 450 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 ACTR5Q9H9F9 607 aaPredicted RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 PPCSQ9HAB8 311 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 CPSF2Q9P2I0 782 aaKnown RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 ANKMY1Q9P2S6 941 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 SNX7Q9UNH6 387 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 DYRK1BQ9Y463 629 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 TMEM184BQ9Y519 407 aaPredicted RBP11.36□□□□□ -0.59
HPS4-214ENST00000485842 KLK4Q9Y5K2 254 aa11.36□□□□□ -0.59
HPS4-214ENST00000485842 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 TLDC2A0PJX2 215 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SRRM3A6NNA2 597 aaPredicted RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 FOXO6A8MYZ6 492 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 GOLGA8RI6L899 631 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 TAPBPO15533 448 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 ZSCAN9O15535 394 aaPredicted RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 EIF2S1P05198 315 aaKnown RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 TUBBP07437 444 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 NUDT17P0C025 328 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 GFAPP14136 432 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 NPPBP16860 134 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 KRT15P19012 456 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 ITPKBP27987 946 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SLC6A12P48065 614 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 HSPA7P48741 367 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 MEF2AQ02078 507 aaPredicted RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 TSNAXIP1Q2TAA8 658 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 TECRLQ5HYJ1 363 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 ZNF425Q6IV72 752 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 C6orf15Q6UXA7 325 aaPredicted RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 TIFABQ6ZNK6 161 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 TMPRSS11BQ86T26 416 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 TCAIMQ8N3R3 496 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 IL22RA1Q8N6P7 574 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 PDPRQ8NCN5 879 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 RHEBL1Q8TAI7 183 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SLC5A11Q8WWX8 675 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 GPR78Q96P69 363 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 OR4K3Q96R72 315 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 ZFYVE21Q9BQ24 234 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SPRY4Q9C004 299 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 CNOT10Q9H9A5 744 aaKnown RBP11.35□□□□□ -0.59
HPS4-214ENST00000485842 STARD5Q9NSY2 213 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 TMEM184CQ9NVA4 438 aa11.35□□□□□ -0.59
HPS4-214ENST00000485842 SLC22A14Q9Y267 594 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms