RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ZNF839A8K0R7 811 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 H0YGG7 62 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 MYO1CO00159 1063 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 PHF2O75151 1096 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 USP1O94782 785 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 KRT14P02533 472 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 FBLP22087 321 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 ARF3P61204 181 aaPredicted RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 CCZ1BP86790 482 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 CCZ1P86791 482 aaPredicted RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 THOC5Q13769 683 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 DHX34Q14147 1143 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 PRTGQ2VWP7 1150 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 TTLL9Q3SXZ7 439 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 ANKRD22Q5VYY1 191 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 CAND1Q86VP6 1230 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 PRSS58Q8IYP2 241 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 COG1Q8WTW3 980 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 C10orf90Q96M02 699 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 BARD1Q99728 777 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 UTP6Q9NYH9 597 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 C3orf18Q9UK00 162 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 CDC14AQ9UNH5 594 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
SMC4-216ENST00000485645 CSAG2Q9Y5P2 127 aa16.35■□□□□ 0.21
SMC4-216ENST00000485645 HEATR5BQ9P2D3 2071 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 A1L4Q6 167 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 SDR42E2A6NKP2 422 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 MAP2K7O14733 419 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 PRPF4O43172 522 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMC4-216ENST00000485645 NRDCO43847 1150 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 CCNDBP1O95273 360 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 HPP00738 406 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 MLNP12872 115 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 ACPPP15309 386 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 CLCN7P51798 805 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 PNLIPRP1P54315 467 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 EMP3P54852 163 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 PRDX1Q06830 199 aaKnown RBP16.34■□□□□ 0.21
SMC4-216ENST00000485645 VWA2Q5GFL6 755 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 ZNF470Q6ECI4 717 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 NEK10Q6ZWH5 1172 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 REXO1L1PQ8IX06 675 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 ZNF669Q96BR6 464 aaPredicted RBP16.34■□□□□ 0.21
SMC4-216ENST00000485645 MVB12AQ96EY5 273 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 CNDP1Q96KN2 507 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 PKP4Q99569 1192 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 TRIM56Q9BRZ2 755 aaKnown RBP16.34■□□□□ 0.21
SMC4-216ENST00000485645 CCDC68Q9H2F9 335 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 TAC3Q9UHF0 121 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 ERRFI1Q9UJM3 462 aaPredicted RBP16.34■□□□□ 0.21
SMC4-216ENST00000485645 NTNG1Q9Y2I2 539 aa16.34■□□□□ 0.21
SMC4-216ENST00000485645 IGLV3-12A0A075B6K2 115 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 Q0VFX4 171 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 ZNF169Q14929 603 aaPredicted RBP16.33■□□□□ 0.2
SMC4-216ENST00000485645 ICE2Q659A1 982 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 ATG9BQ674R7 924 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 TTC27Q6P3X3 843 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 ISLR2Q6UXK2 745 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 PAQR7Q86WK9 346 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 CSNK1A1LQ8N752 337 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 MCUQ8NE86 351 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
SMC4-216ENST00000485645 C8orf44Q96CB5 159 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 C5orf34Q96MH7 638 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 SLC30A3Q99726 388 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 YIPF2Q9BWQ6 316 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 ZNF160Q9HCG1 818 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 XAB2Q9HCS7 855 aaKnown RBP16.33■□□□□ 0.2
SMC4-216ENST00000485645 FBXO6Q9NRD1 293 aaPredicted RBP16.33■□□□□ 0.2
SMC4-216ENST00000485645 KLHL42Q9P2K6 505 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 TRPC4Q9UBN4 977 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 RUVBL1Q9Y265 456 aaKnown RBP16.33■□□□□ 0.2
SMC4-216ENST00000485645 SLC5A6Q9Y289 635 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 NOTCH2Q04721 2471 aa16.33■□□□□ 0.2
SMC4-216ENST00000485645 NSG1A0A0A6YYJ2 146 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 WIPF3A6NGB9 483 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 SLC16A8O95907 504 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 SYF2O95926 243 aaKnown RBP16.32■□□□□ 0.2
SMC4-216ENST00000485645 LDLRP01130 860 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 EZRP15311 586 aaKnown RBP16.32■□□□□ 0.2
SMC4-216ENST00000485645 CXCR2P25025 360 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 TSFMP43897 325 aaKnown RBP16.32■□□□□ 0.2
SMC4-216ENST00000485645 EMP2P54851 167 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 POLEQ07864 2286 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 CDC16Q13042 620 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 CTBP1Q13363 440 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 DSG2Q14126 1118 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 TLR1Q15399 786 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 HKDC1Q2TB90 917 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 GARNL3Q5VVW2 1013 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 B3GNTL1Q67FW5 361 aaPredicted RBP16.32■□□□□ 0.2
SMC4-216ENST00000485645 ZNF425Q6IV72 752 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 LINC00696Q6ZRV3 163 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 DENND6AQ8IWF6 608 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 FBXO15Q8NCQ5 510 aaPredicted RBP16.32■□□□□ 0.2
SMC4-216ENST00000485645 PPFIBP2Q8ND30 876 aa16.32■□□□□ 0.2
SMC4-216ENST00000485645 ST6GALNAC3Q8NDV1 305 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms