RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	AGPS	O00116	658 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	DSCR3	O14972	297 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	KPNA5	O15131	536 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	MED26	O95402	600 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	IGHE	P01854	428 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	ALPP	P05187	535 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	PIM1	P11309	404 aa	Predicted RBP	10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	MMP11	P24347	488 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	LAPTM4A	Q15012	233 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	HIF1A	Q16665	826 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	ACSBG2	Q5FVE4	666 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	TCTE1	Q5JU00	501 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	ANKRD22	Q5VYY1	191 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	MRNIP	Q6NTE8	343 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	CASC4	Q6P4E1	433 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	SUSD1	Q6UWL2	747 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	IGFL3	Q6UXB1	125 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	C4orf22	Q6V702	233 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	LRRC6	Q86X45	466 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	RAB42	Q8N4Z0	105 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	PRELID2	Q8N945	189 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	OR2L3	Q8NG85	312 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	OR2A1	Q8NGT9	310 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	GRHL3	Q8TE85	626 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	LPGAT1	Q92604	370 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZUFSP	Q96AP4	578 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	POM121	Q96HA1	1249 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	SPSB2	Q99619	263 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	MESP1	Q9BRJ9	268 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	RAB11FIP5	Q9BXF6	653 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	ABCF3	Q9NUQ8	709 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	NOVA2	Q9UNW9	492 aa	Known RBP	10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550		A0A1W2PPV9	198 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	HYKK	A2RU49	373 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	TARM1	B6A8C7	271 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	AP3B1	O00203	1094 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	SOCS6	O14544	535 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	FFAR3	O14843	346 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	GPR42	O15529	346 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	SRPX2	O60687	465 aa	Predicted RBP	10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	ALB	P02768	609 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	CCDC175	P0C221	793 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	TPSB2	P20231	275 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	CCNF	P41002	786 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	GPS1	Q13098	491 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	AIMP2	Q13155	320 aa	Known RBP	10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	TPSAB1	Q15661	275 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	RBBP7	Q16576	425 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	KLHL38	Q2WGJ6	581 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	FAM214A	Q32MH5	1076 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	FBXO42	Q6P3S6	717 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	KIRREL2	Q6UWL6	708 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	MAGEC3	Q8TD91	643 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	TM9SF4	Q92544	642 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	FKBP10	Q96AY3	582 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZNF285	Q96NJ3	590 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	SLC30A3	Q99726	388 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	DPH7	Q9BTV6	452 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	YIPF2	Q9BWQ6	316 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	MRM3	Q9HC36	420 aa	Known RBP	10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	SOX13	Q9UN79	622 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	MRFAP1	Q9Y605	127 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	HS3ST3B1	Q9Y662	390 aa		10.09	□□□□□ -0.79
HMGN1-215	ENST00000485550	ARHGEF33	A8MVX0	844 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550		E5RI56	91 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	GOLGA8M	H3BSY2	632 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	PFDN6	O15212	129 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	IPO13	O94829	963 aa	Known RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ONECUT2	O95948	504 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	KRT14	P02533	472 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ESR1	P03372	595 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	STS	P08842	583 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ERVK-10	P10266	1014 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	EDN3	P14138	238 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	PKM	P14618	531 aa	Known RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CMPK1	P30085	196 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	SOX8	P57073	446 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CDK16	Q00536	496 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CTBP1	Q13363	440 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	KCNJ11	Q14654	390 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	TYSND1	Q2T9J0	566 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ANKRD20A4	Q4UJ75	823 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	VWA2	Q5GFL6	755 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	YOD1	Q5VVQ6	348 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRAMEF13	Q5VWM6	474 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	NEPRO	Q6NW34	567 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	TTC27	Q6P3X3	843 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CENPU	Q71F23	418 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	PPFIBP2	Q8ND30	876 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	TRIM58	Q8NG06	486 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	OR9A1P	Q8NGU1	263 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	DNAJB14	Q8TBM8	379 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	STT3B	Q8TCJ2	826 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAR1	Q8WVX9	515 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	MIEF2	Q96C03	454 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	C8orf44	Q96CB5	159 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	THOC3	Q96J01	351 aa	Known RBP	10.08	□□□□□ -0.8

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