RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530	DCDC2	Q9UHG0	476 aa		11.77	□□□□□ -0.53
TRA2B-213	ENST00000485530	SLC22A14	Q9Y267	594 aa		11.77	□□□□□ -0.53
TRA2B-213	ENST00000485530	TLCD2	A6NGC4	264 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530		G3V2L1	256 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TOX3	O15405	576 aa	Predicted RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	RGS16	O15492	202 aa	Predicted RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TYROBP	O43914	113 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	KDM1A	O60341	852 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	DLX3	O60479	287 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	SPAG7	O75391	227 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	RASSF9	O75901	435 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	PROC	P04070	461 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	GSTA1	P08263	222 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	RBP1	P09455	135 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ANKRD34C	P0C6C1	535 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	NELFE	P18615	380 aa	Known RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ITIH1	P19827	911 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	MAG	P20916	626 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ETV5	P41161	510 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	GABRA4	P48169	554 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	HSPA7	P48741	367 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	3e-10	■■■■■ 35.2
TRA2B-213	ENST00000485530	TSTA3	Q13630	321 aa	Predicted RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	PFKFB4	Q16877	469 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TSNAXIP1	Q2TAA8	658 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ARHGAP40	Q5TG30	622 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ICE2	Q659A1	982 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	SULT1C3	Q6IMI6	304 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	THOC6	Q86W42	341 aa	Known RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ZNF248	Q8NDW4	579 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TTC9	Q92623	222 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	PMEPA1	Q969W9	287 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ARL8A	Q96BM9	186 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	PGM2	Q96G03	612 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	MED8	Q96G25	268 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	NAF1	Q96HR8	494 aa	Known RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	SCYL1	Q96KG9	808 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	CD180	Q99467	661 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	EGFL8	Q99944	293 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ZNF768	Q9H5H4	540 aa	Known RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	CPNE5	Q9HCH3	593 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	ACSS2	Q9NR19	701 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	SIDT1	Q9NXL6	827 aa	Known RBP	11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	TAC3	Q9UHF0	121 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	PCDHB11	Q9Y5F2	797 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	KLK4	Q9Y5K2	254 aa		11.76	□□□□□ -0.53
TRA2B-213	ENST00000485530	COL12A1	Q99715	3063 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PIEZO2	Q9H5I5	2752 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530		A0A0J9YY10	115 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CCDC189	A1A4V9	331 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SUPT3H	B4E1H0	165 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530		H7BY64	318 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	MATN2	O00339	956 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SLC28A2	O43868	658 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PLIN3	O60664	434 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CTSV	O60911	334 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SUPT3H	O75486	399 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SIX3	O95343	332 aa	Predicted RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CDH3	P22223	829 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	RPA3	P35244	121 aa	Predicted RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	HNMT	P50135	292 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	UCN	P55089	124 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PCBP4	P57723	403 aa	Known RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	ZNF425	Q6IV72	752 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	KLC3	Q6P597	504 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	FIGLA	Q6QHK4	219 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	FRA10AC1	Q70Z53	315 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	RPS27L	Q71UM5	84 aa	Known RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	RAB11FIP2	Q7L804	512 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	HDX	Q7Z353	690 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	LCA5	Q86VQ0	697 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	D2HGDH	Q8N465	521 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	DNAJC22	Q8N4W6	341 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	RAB42	Q8N4Z0	105 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	ATL1	Q8WXF7	558 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SLC22A18	Q96BI1	424 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PHF21B	Q96EK2	531 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	LIN37	Q96GY3	246 aa	Predicted RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PRAP1	Q96NZ9	151 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	FCRL4	Q96PJ5	515 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	DPH7	Q9BTV6	452 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CD244	Q9BZW8	370 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	MRPL46	Q9H2W6	279 aa	Known RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CENPH	Q9H3R5	247 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	APMAP	Q9HDC9	416 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	NUDT4	Q9NZJ9	180 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SLC17A7	Q9P2U7	560 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PILRA	Q9UKJ1	303 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	SATB2	Q9UPW6	733 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	PLLP	Q9Y342	182 aa		11.75	□□□□□ -0.53
TRA2B-213	ENST00000485530	ANKRD12	Q6UB98	2062 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	ZNF839	A8K0R7	811 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	EFCAB7	A8K855	629 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530		H3BMH7	237 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	PPP6C	O00743	305 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	COPE	O14579	308 aa		11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	HGS	O14964	777 aa	Predicted RBP	11.74	□□□□□ -0.53
TRA2B-213	ENST00000485530	ZBTB11	O95625	1053 aa	Predicted RBP	11.74	□□□□□ -0.53

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