RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PRAMEF9Q5VWM5 478 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 ATG16L1Q676U5 607 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 ZNF574Q6ZN55 896 aaPredicted RBP16.91■□□□□ 0.3
CHMP3-207ENST00000485465 TMPRSS9Q7Z410 1059 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 TMPRSS11BQ86T26 416 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 LSMEM2Q8N112 164 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 CARFQ8N187 725 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 ABHD11Q8NFV4 315 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 OR4D9Q8NGE8 314 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 OR52B6Q8NGF0 335 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 ZNF382Q96SR6 550 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 MAP3K3Q99759 626 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 DPH7Q9BTV6 452 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 NTMT1Q9BV86 223 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 PELI2Q9HAT8 420 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 KLHL3Q9UH77 587 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 SNX7Q9UNH6 387 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 STK38LQ9Y2H1 464 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 KLHL20Q9Y2M5 609 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 KLK4Q9Y5K2 254 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 H7BY64 318 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 UBFD1O14562 309 aaKnown RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 KLF11O14901 512 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 OTCP00480 354 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 C1GALT1C1LP0DN25 315 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 PVRP15151 417 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 MPSTP25325 297 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ARRB2P32121 409 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 MDH1P40925 334 aaKnown RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 CASP2P42575 452 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 SLC1A6P48664 564 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 CCR8P51685 355 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ABCE1P61221 599 aaKnown RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 GUCY1A3Q02108 690 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 IRF8Q02556 426 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 BST1Q10588 318 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 TRAF3Q13114 568 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 CHIT1Q13231 466 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 SPIDRQ14159 915 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 DOC2AQ14183 400 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 NAA25Q14CX7 972 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 TBCCQ15814 346 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 XKR6Q5GH73 641 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ARL13AQ5H913 290 aaPredicted RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ATG9BQ674R7 924 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ZNF425Q6IV72 752 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 FIGLAQ6QHK4 219 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 OR4K1Q8NGD4 311 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ZUFSPQ96AP4 578 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 WDR34Q96EX3 536 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 MAGEB18Q96M61 343 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 PRAP1Q96NZ9 151 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 TRAPPC9Q96Q05 1148 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 EHD1Q9H4M9 534 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 TMEM184CQ9NVA4 438 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 SEMA5BQ9P283 1151 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 PDP2Q9P2J9 529 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 ANKMY1Q9P2S6 941 aa16.9■□□□□ 0.3
CHMP3-207ENST00000485465 CDV3Q9UKY7 258 aaKnown RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 GOLGA4Q13439 2230 aaKnown RBP16.9■□□□□ 0.3
CHMP3-207ENST00000485465 A0A1B0GTL3 188 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 SLC9B1P1A6NJY1 282 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 D6RAR5 112 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ITM2AO43736 263 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 RASSF9O75901 435 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 WFS1O76024 890 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 CLDN9O95484 217 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 CHRNGP07510 517 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 EBLN1P0CF75 366 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ST6GAL1P15907 406 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 MAGP20916 626 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 VARSP26640 1264 aaKnown RBP16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ARL1P40616 181 aaPredicted RBP16.89■□□□□ 0.29
CHMP3-207ENST00000485465 PKNOX1P55347 436 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ERVPABLB-1P60509 514 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 SH3BP2P78314 561 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 CSNK1G2P78368 415 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 E2F2Q14209 437 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 SNAP47Q5SQN1 464 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 LIPJQ5W064 366 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 FCRL6Q6DN72 434 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ATG14Q6ZNE5 492 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 GPRIN3Q6ZVF9 776 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 PRSS42Q7Z5A4 293 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 MILR1Q7Z6M3 343 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 SYVN1Q86TM6 617 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 SLCO6A1Q86UG4 719 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 PAQR7Q86WK9 346 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 FAM129CQ86XR2 697 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 AGAP11Q8TF27 550 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 PTCD3Q96EY7 689 aaKnown RBP16.89■□□□□ 0.29
CHMP3-207ENST00000485465 CDK15Q96Q40 435 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 KLHL25Q9H0H3 589 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF395Q9H8N7 513 aaPredicted RBP16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ACTR8Q9H981 624 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms