RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FGGP02679 453 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 ESR1P03372 595 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 ERGP11308 486 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 ATP5DP30049 168 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 TRIP13Q15645 432 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-205ENST00000485397 KLHL38Q2WGJ6 581 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 ANKRD20A4Q4UJ75 823 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 RNF187Q5TA31 235 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-205ENST00000485397 B3GNTL1Q67FW5 361 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-205ENST00000485397 PAQR7Q86WK9 346 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 SMPDL3AQ92484 453 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 PLCD4Q9BRC7 762 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 YIPF2Q9BWQ6 316 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 MRPS30Q9NP92 439 aaKnown RBP18.32■□□□□ 0.52
COL27A1-205ENST00000485397 RUVBL1Q9Y265 456 aaKnown RBP18.32■□□□□ 0.52
COL27A1-205ENST00000485397 MYO1CO00159 1063 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 LRRTM2O43300 516 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 AVILO75366 819 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 PSIP1O75475 530 aaKnown RBP18.31■□□□□ 0.52
COL27A1-205ENST00000485397 F7P08709 466 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-205ENST00000485397 COX6A1P12074 109 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 EDN3P14138 238 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TPSB2P20231 275 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 RPA3P35244 121 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-205ENST00000485397 EMP2P54851 167 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 NAA25Q14CX7 972 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TPSAB1Q15661 275 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 HKDC1Q2TB90 917 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 KIAA0930Q6ICG6 404 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-205ENST00000485397 CENPUQ71F23 418 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 KBTBD2Q8IY47 623 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 CSNK1A1LQ8N752 337 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TCF12Q99081 682 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 PKP4Q99569 1192 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 SLC30A3Q99726 388 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TRIM56Q9BRZ2 755 aaKnown RBP18.31■□□□□ 0.52
COL27A1-205ENST00000485397 PLA2G3Q9NZ20 509 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TRPC4Q9UBN4 977 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 TAC3Q9UHF0 121 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 ZKSCAN5Q9Y2L8 839 aa18.31■□□□□ 0.52
COL27A1-205ENST00000485397 NSG1A0A0A6YYJ2 146 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 IDSB3KWA1 339 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 PFDN6O15212 129 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 VPS26AO75436 327 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 PKMP14618 531 aaKnown RBP18.3■□□□□ 0.52
COL27A1-205ENST00000485397 OGNP20774 298 aaKnown RBP18.3■□□□□ 0.52
COL27A1-205ENST00000485397 ADARP55265 1226 aaKnown RBP18.3■□□□□ 0.52
COL27A1-205ENST00000485397 CDK16Q00536 496 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 EEF1A2Q05639 463 aaKnown RBP18.3■□□□□ 0.52
COL27A1-205ENST00000485397 KCNJ11Q14654 390 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 FAAH2Q6GMR7 532 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 NDUFAF7Q7L592 441 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 AMER2Q8N7J2 671 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 PPFIBP2Q8ND30 876 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 OR1N1Q8NGS0 311 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 BRIX1Q8TDN6 353 aaKnown RBP18.3■□□□□ 0.52
COL27A1-205ENST00000485397 PSMF1Q92530 271 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 PTGFRNQ9P2B2 879 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 CDC14AQ9UNH5 594 aa18.3■□□□□ 0.52
COL27A1-205ENST00000485397 SVILO95425 2214 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 CROCCQ5TZA2 2017 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 E5RI56 91 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 USP1O94782 785 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 CATP04040 527 aaKnown RBP18.29■□□□□ 0.52
COL27A1-205ENST00000485397 CELA2AP08217 269 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 PRR35P0CG20 571 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 SOX11P35716 441 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 VPS41P49754 854 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 PNLIPRP1P54315 467 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 EMP3P54852 163 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ARG2P78540 354 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 PRDX1Q06830 199 aaKnown RBP18.29■□□□□ 0.52
COL27A1-205ENST00000485397 DSG2Q14126 1118 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ARHGAP19Q14CB8 494 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ICE2Q659A1 982 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ZNF425Q6IV72 752 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 NEPROQ6NW34 567 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 FAM180AQ6UWF9 173 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 CILP2Q8IUL8 1156 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 SIRT6Q8N6T7 355 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 AMER3Q8N944 861 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 MAIP1Q8WWC4 291 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 MMABQ96EY8 250 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-205ENST00000485397 OR2A5Q96R48 311 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 LZTFL1Q9NQ48 299 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 FAM114A2Q9NRY5 505 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ABCF3Q9NUQ8 709 aa18.29■□□□□ 0.52
COL27A1-205ENST00000485397 DIDO1Q9BTC0 2240 aaKnown RBP18.29■□□□□ 0.52
COL27A1-205ENST00000485397 ZGRF1Q86YA3 2104 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 FOXS1O43638 330 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 CEP104O60308 925 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 CXCR2P25025 360 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 CLCN7P51798 805 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 SYT16Q17RD7 645 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 ANKRD22Q5VYY1 191 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 RPUSD3Q6P087 351 aaKnown RBP18.28■□□□□ 0.52
COL27A1-205ENST00000485397 CASC4Q6P4E1 433 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 ARHGEF39Q8N4T4 335 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 PRELID2Q8N945 189 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms