RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RHOJQ9H4E5 214 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 RRAGDQ9NQL2 400 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 INTS7Q9NVH2 962 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 TXNDC16Q9P2K2 825 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 KLK4Q9Y5K2 254 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 MED13Q9UHV7 2174 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 CREBBPQ92793 2442 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 A0A0J9YY10 115 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ANKUB1A6NFN9 424 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 WIPF3A6NGB9 483 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 FAM159BA6NKW6 160 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TARM1B6A8C7 271 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TMEM150CB9EJG8 249 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ENO2P09104 434 aaPredicted RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TPBGLP0DKB5 382 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 CYP2A7P20853 494 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TNFRSF8P28908 595 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 PHBP35232 272 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 GLRBP48167 497 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 IL2P60568 153 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 SLC7A5Q01650 507 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 POU4F1Q01851 419 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 HECTD2Q5U5R9 776 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 CYHR1Q6ZMK1 362 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 STRA8Q7Z7C7 330 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ZC3HC1Q86WB0 502 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 RAB43Q86YS6 212 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 IFT20Q8IY31 132 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 SYTL1Q8IYJ3 562 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 MYO1HQ8N1T3 1032 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 NKAPQ8N5F7 415 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 NOA1Q8NC60 698 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 OR9A1PQ8NGU1 263 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 OR1L3Q8NH93 324 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ZUFSPQ96AP4 578 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TSPAN17Q96FV3 270 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 TRAPPC9Q96Q05 1148 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 OR2A14Q96R47 310 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 SMAD5Q99717 465 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 MCMBPQ9BTE3 642 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 FUT8Q9BYC5 575 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ILKAPQ9H0C8 392 aaPredicted RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 L2HGDHQ9H9P8 463 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ENAMQ9NRM1 1142 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 PCMTD2Q9NV79 361 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 UTP6Q9NYH9 597 aaKnown RBP9.6□□□□□ -0.87
CPSF4-213ENST00000484112 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
CPSF4-213ENST00000484112 ESYT3A0FGR9 886 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 ISM1B1AKI9 464 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CCNDBP1O95273 360 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 HBQ1P09105 142 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 HIST1H2AGP0C0S8 130 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 UGT2B7P16662 529 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 HIST1H2ADP20671 130 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 AGXTP21549 392 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CCND1P24385 295 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 SSTR1P30872 391 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 RORAP35398 523 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 GP5P40197 560 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 AP1S2P56377 157 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 GPX6P59796 221 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 TIAL1Q01085 375 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 RELAQ04206 551 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 SLMAPQ14BN4 828 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 GRTP1Q5TC63 336 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 VWA5B1Q5TIE3 1220 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 MLIPQ5VWP3 458 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 C1QL3Q5VWW1 255 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 FAM198BQ6UWH4 519 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CCDC91Q7Z6B0 441 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CCDC25Q86WR0 208 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CPNE9Q8IYJ1 553 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 GPATCH11Q8N954 259 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 C19orf47Q8N9M1 422 aaKnown RBP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 LINC01555Q8NAE3 123 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 FLVCR1-AS1Q8TAF5 88 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 MCOLN3Q8TDD5 553 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 DENND1AQ8TEH3 1009 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 SMPDL3AQ92484 453 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 HIST1H2AHQ96KK5 128 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 CCDC138Q96M89 665 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 FMO2Q99518 471 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 NDNQ99608 321 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 SLC30A3Q99726 388 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 HIST1H2AJQ99878 128 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 H2AFJQ9BTM1 129 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 KLHL25Q9H0H3 589 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 PCBD2Q9H0N5 130 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 XKR8Q9H6D3 395 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 PARVBQ9HBI1 364 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 C5AR2Q9P296 337 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 GALPQ9UBC7 116 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 DMGDHQ9UI17 866 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms