RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ZNF700Q9H0M5 742 aa12.18□□□□□ -0.46
TMEM54-206ENST00000482771 RIC8BQ9NVN3 520 aa12.18□□□□□ -0.46
TMEM54-206ENST00000482771 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
TMEM54-206ENST00000482771 NFS1Q9Y697 457 aa12.18□□□□□ -0.46
TMEM54-206ENST00000482771 A0A1W2PQ72 361 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF189O75820 626 aaPredicted RBP12.17□□□□□ -0.46
TMEM54-206ENST00000482771 C1orf105O95561 183 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 GAS8O95995 478 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 CAPN3P20807 821 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 AGAP20933 346 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 SLC26A3P40879 764 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 BDKRB1P46663 353 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 NAP1L1P55209 391 aaKnown RBP12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF33BQ06732 778 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 DSG2Q14126 1118 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 TMED2Q15363 201 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 TESK1Q15569 626 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 P3H1Q32P28 736 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 TSTD2Q5T7W7 516 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 LRRC8BQ6P9F7 803 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 AFTPHQ6ULP2 937 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF534Q76KX8 674 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 RAB42Q8N4Z0 105 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 MMABQ96EY8 250 aaPredicted RBP12.17□□□□□ -0.46
TMEM54-206ENST00000482771 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF778Q96MU6 729 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ZFYVE21Q9BQ24 234 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 DPH7Q9BTV6 452 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ACAT2Q9BWD1 397 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 ANAPC5Q9UJX4 755 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 MKL2Q9ULH7 1088 aa12.17□□□□□ -0.46
TMEM54-206ENST00000482771 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 A0A1W2PPV9 198 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 FAM227AF5H4B4 570 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 CLDN14O95500 239 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 PTMAP06454 111 aaKnown RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 ANXA5P08758 320 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 ADRA1DP25100 572 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 CMPK1P30085 196 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 GRIA1P42261 906 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 EMP3P54852 163 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 GDF10P55107 478 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 AP2B1P63010 937 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 CDH17Q12864 832 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 FASTKQ14296 549 aaKnown RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 PCOLCEQ15113 449 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 SPA17Q15506 151 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 LONRF1Q17RB8 773 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 SYT16Q17RD7 645 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 PTRHD1Q6GMV3 140 aaKnown RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 TMEM205Q6UW68 189 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 SPPL2CQ8IUH8 684 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 CEP97Q8IW35 865 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 AMER3Q8N944 861 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 HMGCLL1Q8TB92 370 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 ALG3Q92685 438 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 TMEM121Q9BTD3 319 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 TUBB6Q9BUF5 446 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 MKKSQ9NPJ1 570 aaPredicted RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 C14orf105Q9NVL8 296 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 TEKT2Q9UIF3 430 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 RUVBL1Q9Y265 456 aaKnown RBP12.16□□□□□ -0.46
TMEM54-206ENST00000482771 DUSP10Q9Y6W6 482 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 GTF3C1Q12789 2109 aa12.16□□□□□ -0.46
TMEM54-206ENST00000482771 CACNA1CQ13936 2221 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 PRMT5O14744 637 aaPredicted RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 TTI1O43156 1089 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 ST13P50502 369 aaKnown RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 PRAMEP78395 509 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 HKDC1Q2TB90 917 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 KRTCAP3Q53RY4 240 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 FCRLBQ6BAA4 426 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 PPP1R21Q6ZMI0 780 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 CSNK1A1LQ8N752 337 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 MAGED4Q96JG8 741 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 FOPNLQ96NB1 174 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 TSPAN10Q9H1Z9 355 aaPredicted RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 SYNPO2LQ9H987 977 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 ETNK1Q9HBU6 452 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 MRPS30Q9NP92 439 aaKnown RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 KLHL1Q9NR64 748 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 MARCH4Q9P2E8 410 aaPredicted RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
TMEM54-206ENST00000482771 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
TMEM54-206ENST00000482771 MEMO1Q9Y316 297 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms