RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MAB21L1Q13394 359 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 BFSP2Q13515 415 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 IL18Q14116 193 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 GSTA3Q16772 222 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FAM83EQ2M2I3 478 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 VWC2Q2TAL6 325 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ALKBH6Q3KRA9 238 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TMEM119Q4V9L6 283 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 BEX5Q5H9J7 111 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ZNF569Q5MCW4 686 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TSTD2Q5T7W7 516 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SCYL2Q6P3W7 929 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TEX38Q6PEX7 206 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SASS6Q6UVJ0 657 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 RRM2BQ7LG56 351 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 KRT27Q7Z3Y8 459 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TRMT11Q7Z4G4 463 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 NANOGNBQ7Z5D8 188 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TECPR1Q7Z6L1 1165 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PIGWQ7Z7B1 504 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 YRDCQ86U90 279 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 ZNF595Q8IYB9 648 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 GPR65Q8IYL9 337 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 LSMEM2Q8N112 164 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 LINC01465Q8N7H1 131 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FAM86B1Q8N7N1 296 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 C12orf76Q8N812 135 aaPredicted RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 LEMD2Q8NC56 503 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ZNF461Q8TAF7 563 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ZNF596Q8TC21 504 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TSEN15Q8WW01 171 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 RAB40AQ8WXH6 277 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PIGBQ92521 554 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CNOT9Q92600 299 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 SLC35B4Q969S0 331 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SLC25A28Q96A46 364 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SNRNP40Q96DI7 357 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 PABPC5Q96DU9 382 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 REXO5Q96IC2 774 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 FAR2Q96K12 515 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 C4orf36Q96KX1 117 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TMEM68Q96MH6 324 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FAM20AQ96MK3 541 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SNX18Q96RF0 628 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SIGLEC11Q96RL6 698 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PCDHB18PQ96TA0 734 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 UPF3BQ9BZI7 483 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 SHCBP1LQ9BZQ2 653 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 UBQLN3Q9H347 655 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ACTR8Q9H981 624 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FN3KRPQ9HA64 309 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 LMAN1LQ9HAT1 526 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 IL26Q9NPH9 171 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 LZTFL1Q9NQ48 299 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FARSBQ9NSD9 589 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 EURLQ9NYK6 297 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CNOT2Q9NZN8 540 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 NDUFA13Q9P0J0 144 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SEMA5BQ9P283 1151 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PEF1Q9UBV8 284 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 DCDC2Q9UHG0 476 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CYTH4Q9UIA0 394 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 GGA2Q9UJY4 613 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TTC7AQ9ULT0 858 aaPredicted RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 ST3GAL5Q9UNP4 418 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 MRPS7Q9Y2R9 242 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 WBP11Q9Y2W2 641 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 CMAHPQ9Y471 501 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TTC21AQ8NDW8 1320 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 A0A0U1RQS6 177 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 A0A0U1RQV5 110 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 MACROD2A1Z1Q3 448 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 C17orf100A8MU93 164 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 UBE2Q2LH0YL09 131 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 H7C1Q1 480 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 HAS3O00219 553 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 HIP1O00291 1037 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 PPP6CO00743 305 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 ZNF213O14771 459 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 MGST3O14880 152 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 CRCPO75575 148 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 JTBO76095 146 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 ZWINTO95229 277 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 HLA-DRAP01903 254 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 SRPRAP08240 638 aaKnown RBP3.98□□□□□ -1.77
VPS41-212ENST00000482217 IL7RP16871 459 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 NAGAP17050 411 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 NCF2P19878 526 aaPredicted RBP3.98□□□□□ -1.77
VPS41-212ENST00000482217 FPR3P25089 353 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 PSMB4P28070 264 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 DUSP1P28562 367 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 RRM2P31350 389 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 IGHMBP2P38935 993 aaKnown RBP3.98□□□□□ -1.77
VPS41-212ENST00000482217 PLA2G5P39877 138 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 CETN2P41208 172 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 ALDH3B1P43353 468 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 MTNR1AP48039 350 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 KCNJ4P48050 445 aa3.98□□□□□ -1.77
VPS41-212ENST00000482217 FNTAP49354 379 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms