RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MUTP22033 750 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 KRT2P35908 639 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 TNNT3P45378 269 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 PTK6Q13882 451 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 EXT1Q16394 746 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 GTDC1Q4AE62 458 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 LYSMD4Q5XG99 296 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 NOA1Q8NC60 698 aaKnown RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 SEPT1Q8WYJ6 367 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 DNASE1L2Q92874 299 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 RIT1Q92963 219 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 HES6Q96HZ4 224 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 CCDC114Q96M63 670 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-210ENST00000482158 MINDY3Q9H8M7 445 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 ERAP1Q9NZ08 941 aa5.07□□□□□ -1.6
SF3B1-210ENST00000482158 PRR23AA6NEV1 266 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 FPGTO14772 594 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 IFIT3O14879 490 aaKnown RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 PPIP5K2O43314 1243 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 GLRA3O75311 464 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 AP2A2O94973 939 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 PGLSO95336 258 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 EML2O95834 649 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 PLGP00747 810 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 CEACAM1P13688 526 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 LHCGRP22888 699 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 CHRNB4P30926 498 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 DUTP33316 252 aaKnown RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 MAGEA11P43364 429 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 KCNJ1P48048 391 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 GLIPR1P48060 266 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 TRAP1Q12931 704 aaKnown RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 NHSL2Q5HYW2 709 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 ARHGEF16Q5VV41 709 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 TMEM207Q6UWW9 146 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 MSANTD1Q6ZTZ1 278 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 MARVELD2Q8N4S9 558 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 CNBD1Q8NA66 436 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 NHLRC2Q8NBF2 726 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 OR13C3Q8NGS6 347 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 DYRK2Q92630 601 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 PYCR2Q96C36 320 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 C4orf45Q96LM5 186 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 C10orf90Q96M02 699 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 GDAP1L1Q96MZ0 367 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 ALDH8A1Q9H2A2 487 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 SNX25Q9H3E2 840 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 ZNF696Q9H7X3 374 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 CHST11Q9NPF2 352 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 C2orf42Q9NWW7 574 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 GRID1Q9ULK0 1009 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 NOL7Q9UMY1 257 aaKnown RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 CHKBQ9Y259 395 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 PPP2R2CQ9Y2T4 447 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 ZFP37Q9Y6Q3 630 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-210ENST00000482158 R4GN57 208 aa5.06□□□□□ -1.6
SF3B1-210ENST00000482158 A4D1N5 150 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 C17orf105B2RV13 164 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 KLF11O14901 512 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 FLRT2O43155 660 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 KHDRBS3O75525 346 aaKnown RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 CDK2AP2O75956 126 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 SLU7O95391 586 aaKnown RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 ANKRD34CP0C6C1 535 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 CD59P13987 128 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 MYL6BP14649 208 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 SP3Q02447 781 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 CACNG1Q06432 222 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 E2F5Q15329 346 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 MEP1BQ16820 701 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 TWISTNBQ3B726 338 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 ZNF876PQ49A33 203 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 ZNF790Q6PG37 636 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 NHLRC1Q6VVB1 395 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 OTOAQ7RTW8 1153 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 ZNF329Q86UD4 541 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 UXS1Q8NBZ7 420 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 OR1L3Q8NH93 324 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 KLHL5Q96PQ7 755 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 PARK7Q99497 189 aaKnown RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 LITAFQ99732 161 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 GPATCH1Q9BRR8 931 aaKnown RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 FSD1Q9BTV5 496 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 PANK2Q9BZ23 570 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 DDX43Q9NXZ2 648 aaKnown RBP5.05□□□□□ -1.6
SF3B1-210ENST00000482158 GAB2Q9UQC2 676 aa5.05□□□□□ -1.6
SF3B1-210ENST00000482158 F8VVB4 439 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 F8VWA3 439 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 H0YAE9 185 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 PAK4O96013 591 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-210ENST00000482158 STAG3L1P0CL83 205 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 F3P13726 295 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 EPORP19235 508 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 ALDH4A1P30038 563 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 TCF7P36402 384 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms