RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 OR2T12Q8NG77 320 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 OLIG1Q8TAK6 271 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 SLC13A3Q8WWT9 602 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 PRAM1Q96QH2 718 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 RUFY1Q96T51 708 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 C17orf62Q9BQA9 187 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 POLR3CQ9BUI4 534 aaPredicted RBP4.76□□□□□ -1.65
UPF3B-203ENST00000478840 XPO4Q9C0E2 1151 aaKnown RBP4.76□□□□□ -1.65
UPF3B-203ENST00000478840 TSPYL1Q9H0U9 437 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 C1orf21Q9H246 121 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 PELI2Q9HAT8 420 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 MAGEF1Q9HAY2 307 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 MRPL17Q9NRX2 175 aaKnown RBP4.76□□□□□ -1.65
UPF3B-203ENST00000478840 SLC38A7Q9NVC3 462 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 MIS18AQ9NYP9 233 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 TRMT6Q9UJA5 497 aaKnown RBP4.76□□□□□ -1.65
UPF3B-203ENST00000478840 GMEB2Q9UKD1 530 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 SLC7A7Q9UM01 511 aa4.76□□□□□ -1.65
UPF3B-203ENST00000478840 TDRKHQ9Y2W6 561 aaKnown RBP4.76□□□□□ -1.65
UPF3B-203ENST00000478840 TRBV2A0A0J9YWF9 115 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 A0A1W2PS18 150 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 C2orf81A6NN90 581 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 C17orf105B2RV13 164 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 NPIPA3F8WFD2 350 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 H0YIG0 161 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 XPNPEP2O43895 674 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 B3GALNT1O75752 331 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PAPSS2O95340 614 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PIGNO95427 931 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 SERPING1P05155 500 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 MAGEB1P43366 347 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 NKX2-1P43699 371 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 LUMP51884 338 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 MAZP56270 477 aaKnown RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 B3GALT5-AS1P59052 145 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PITX1P78337 314 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 TAF10Q12962 218 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 NONOQ15233 471 aaKnown RBP eCLIP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 STXBP5Q5T5C0 1151 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 AGAP6Q5VW22 663 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 KLHL10Q6JEL2 608 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 CREB3L2Q70SY1 520 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 MAPKAPK5-AS1Q8N8E1 139 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 OR1J1Q8NGS3 322 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 OR52N5Q8NH56 324 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PHLDA1Q8WV24 401 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 RTP4Q96DX8 246 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 ZNF778Q96MU6 729 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 TSSK2Q96PF2 358 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 TRAF4Q9BUZ4 470 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 ACPTQ9BZG2 426 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 MTMR12Q9C0I1 747 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 LAT2Q9GZY6 243 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 ABCG8Q9H221 673 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 HSD3B7Q9H2F3 369 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 SLITRK6Q9H5Y7 841 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 A4GALTQ9NPC4 353 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PHPT1Q9NRX4 125 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 FGF21Q9NSA1 209 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 TRIM10Q9UDY6 481 aa4.75□□□□□ -1.65
UPF3B-203ENST00000478840 NOCTQ9UK39 431 aaKnown RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PIN4Q9Y237 131 aaKnown RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 RPH3AQ9Y2J0 694 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 MTF2Q9Y483 593 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-203ENST00000478840 PFASO15067 1338 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 IL16Q14005 1332 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 A0A087X0K7 114 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 KRT87PA6NCN2 255 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 APOHP02749 345 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ALPPP05187 535 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ABHD2P08910 425 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ACAA1P09110 424 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 STAG3L1P0CL83 205 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ALPPL2P10696 532 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 FGF5P12034 268 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 CD59P13987 128 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ELAVL4P26378 380 aaKnown RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 IL15P40933 162 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 LTBQ06643 244 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 LGALS3BPQ08380 585 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 UGP2Q16851 508 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 IFI44LQ53G44 452 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 CCNYL2Q5T2Q4 361 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 IRAK1BP1Q5VVH5 260 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 KIAA0895Q8NCT3 520 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ZNF473Q8WTR7 871 aaKnown RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 SLC47A1Q96FL8 570 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 SCRN2Q96FV2 425 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 RUNDC3BQ96NL0 473 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 SDCBP2Q9H190 292 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 ZBTB20Q9HC78 741 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 SDR39U1Q9NRG7 319 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 HPF1Q9NWY4 346 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 NINJ2Q9NZG7 142 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 STUB1Q9UNE7 303 aa4.74□□□□□ -1.65
UPF3B-203ENST00000478840 RUVBL2Q9Y230 463 aaKnown RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 FOXA2Q9Y261 457 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-203ENST00000478840 SYCE3A1L190 88 aa4.73□□□□□ -1.65
UPF3B-203ENST00000478840 SCO2O43819 266 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms