RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RMDN2Q96LZ7 410 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLX1AQ9BQ83 275 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 FNDC11Q9BVV2 318 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM129AQ9BZQ8 928 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 CSTL1Q9H114 145 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 FKRPQ9H9S5 495 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 TBC1D17Q9HA65 648 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 SCRT2Q9NQ03 307 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 MRGBPQ9NV56 204 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 MIOSQ9NXC5 875 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 KCNS2Q9ULS6 477 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 GREB1LQ9C091 1923 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 LAMB1P07942 1786 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ATP10DQ9P241 1426 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SRCAPQ6ZRS2 3230 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 IGHV4OR15-8A0A075B7B6 117 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 A0A0G2JNG1 304 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 TEX13DA0A0J9YY54 714 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 MED19A0JLT2 244 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ANTXRLA6NF34 631 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ANXA2P2A6NMY6 339 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SYNCRIPO60506 623 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 CRYAAP02489 173 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ATP5BP06576 529 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 H1F0P07305 194 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR52Z1P0C646 297 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 MCCP23508 829 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 HOXC13P31276 330 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 CTNNA1P35221 906 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 COPB2P35606 906 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 CRKLP46109 303 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ASCL1P50553 236 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 CRIP2P52943 208 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 TEFQ10587 303 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZBTB17Q13105 803 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 KIR2DS5Q14953 304 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 C6orf136Q5SQH8 315 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 C11orf88Q6PI97 169 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PLXDC2Q6UX71 529 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PACS1Q6VY07 963 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SFR1Q86XK3 245 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PTOV1Q86YD1 416 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF441Q8N8Z8 693 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 GOT1L1Q8NHS2 421 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZFAND2BQ8WV99 257 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 DAZLQ92904 295 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 EXT2Q93063 718 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SPSB1Q96BD6 273 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 SFXN2Q96NB2 322 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 CITED2Q99967 270 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 MGME1Q9BQP7 344 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 MMP28Q9H239 520 aa3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 PNNQ9H307 717 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ARGLU1Q9NWB6 273 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 ABT1Q9ULW3 272 aaKnown RBP3.78□□□□□ -1.8
CDC42BPA-212ENST00000478573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.78□□□□□ -1.82e-10■□□□□ 8.9
CDC42BPA-212ENST00000478573 MAPK8IP3Q9UPT6 1336 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ADAMTSL1Q8N6G6 1762 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 PSMD14O00487 310 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CLDN4O14493 209 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CLIC2O15247 247 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZG16O60844 167 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 PENKP01210 267 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 TFAP2AP05549 437 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CDH1P12830 882 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 MUTP22033 750 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 SP100P23497 879 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CDC25CP30307 473 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC6A6P31641 620 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 TERF1P54274 439 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 NAGLUP54802 743 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 GAGE5Q13069 117 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 GAGE6Q13070 117 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 KRT71Q3SY84 523 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CAVIN1Q6NZI2 390 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZNF790Q6PG37 636 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 PPP1R21Q6ZMI0 780 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZBTB49Q6ZSB9 765 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 DNAJB7Q7Z6W7 309 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ABI3BPQ7Z7G0 1075 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 GPALPP1Q8IXQ4 340 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM9BQ8IZU0 186 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CCAR2Q8N163 923 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CPSF7Q8N684 471 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 FBXO17Q96EF6 278 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZNF558Q96NG5 402 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 FEVQ99581 238 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 TEX13AQ9BXU3 409 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 FZD8Q9H461 694 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 GRPEL1Q9HAV7 217 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 ACKR4Q9NPB9 350 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms