RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ITGA2P17301 1181 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 CCR7P32248 378 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 GGT5P36269 586 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 SLC16A1P53985 500 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 Q8N9G6 341 aaPredicted RBP11.65□□□□□ -0.54
PCCB-214ENST00000478469 FAM13CQ8NE31 585 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 PRRG3Q9BZD7 231 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 ALG2Q9H553 416 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 OR6C74A6NCV1 312 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 NUAK1O60285 661 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 DNAJA2O60884 412 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 KRT36O76013 467 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 G6PDP11413 515 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 SRFP11831 508 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 CSNK2A2P19784 350 aaPredicted RBP11.65□□□□□ -0.54
PCCB-214ENST00000478469 DOC2AQ14183 400 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 HERC3Q15034 1050 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 ZNF786Q8N393 782 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 UTP15Q8TED0 518 aaKnown RBP11.65□□□□□ -0.54
PCCB-214ENST00000478469 DPH7Q9BTV6 452 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 GIMAP2Q9UG22 337 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 TMEM150CB9EJG8 249 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 ERN1O75460 977 aaKnown RBP11.65□□□□□ -0.54
PCCB-214ENST00000478469 VNN2O95498 520 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 GABRB3P28472 473 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 IFNGR2P38484 337 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 ETV4P43268 484 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 SEPHS1P49903 392 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 OCA2Q04671 838 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 LRP8Q14114 963 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 PHF19Q5T6S3 580 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 RINLQ6ZS11 566 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 OR9I1Q8NGQ6 314 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
PCCB-214ENST00000478469 SPATA7Q9P0W8 599 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 PRSS21Q9Y6M0 314 aa11.65□□□□□ -0.54
PCCB-214ENST00000478469 MPIP34949 423 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 SRP54P61011 504 aaKnown RBP11.65□□□□□ -0.55
PCCB-214ENST00000478469 BTN3A2P78410 334 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 TOR1AIP1Q5JTV8 583 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 CDKL4Q5MAI5 379 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 NATD1Q8N6N6 113 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 OR10A6Q8NH74 314 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 KRT84Q9NSB2 600 aa11.65□□□□□ -0.55
PCCB-214ENST00000478469 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.55
PCCB-214ENST00000478469 ZNF282Q9UDV7 671 aaPredicted RBP11.65□□□□□ -0.55
PCCB-214ENST00000478469 SAMD4AQ9UPU9 718 aaKnown RBP11.65□□□□□ -0.55
PCCB-214ENST00000478469 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 G3V2L1 256 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 GCAP28676 217 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 DGKQP52824 942 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 HHEXQ03014 270 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 PWP1Q13610 501 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 PHTF2Q8N3S3 785 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 RASGEF1AQ8N9B8 481 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 ACVR1CQ8NER5 493 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 FBXL8Q96CD0 374 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 ZDHHC12Q96GR4 267 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 CNPPD1Q9BV87 410 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 SEC14L3Q9UDX4 400 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 SUFUQ9UMX1 484 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 ATXN2Q99700 1313 aaKnown RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 H3BN98 237 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 SDHDO14521 159 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 AP3D1O14617 1153 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 JUPP14923 745 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 GTF2E2P29084 291 aaKnown RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 PRLHRP49683 370 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 CLK3P49761 638 aaKnown RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 GCNT6Q5T4J0 391 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 SPRED2Q7Z698 418 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 JPH3Q8WXH2 748 aaPredicted RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 FAM53CQ9NYF3 392 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 STOX2Q9P2F5 926 aaPredicted RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 RAPGEFL1Q9UHV5 662 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 PCTPQ9UKL6 214 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 GBAP04062 536 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 LHCGRP22888 699 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 DUSP3P51452 185 aaPredicted RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 DCDC1P59894 354 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 SPESP1Q6UW49 350 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 NEK10Q6ZWH5 1172 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 TMEM150AQ86TG1 271 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 OR5AR1Q8NGP9 310 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 RHBDF1Q96CC6 855 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 L3HYPDHQ96EM0 354 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 NDC1Q9BTX1 674 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
PCCB-214ENST00000478469 MRTO4Q9UKD2 239 aaKnown RBP11.64□□□□□ -0.55
PCCB-214ENST00000478469 OR52A4PA6NMU1 304 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 H3BNH8 94 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms