RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 LRRC8BQ6P9F7 803 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 SUSD1Q6UWL2 747 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 ARHGEF39Q8N4T4 335 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 AMER2Q8N7J2 671 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 OR9A1PQ8NGU1 263 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 FAM136AQ96C01 138 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 VPS50Q96JG6 964 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 FOPNLQ96NB1 174 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 TSR3Q9UJK0 312 aaKnown RBP15.91■□□□□ 0.14
TRIM13-208ENST00000478111 OSGIN2Q9Y236 505 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 FBN2P35556 2912 aa15.91■□□□□ 0.14
TRIM13-208ENST00000478111 PDZD2O15018 2839 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 MYO1CO00159 1063 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 MAP2K7O14733 419 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 PSIP1O75475 530 aaKnown RBP15.9■□□□□ 0.14
TRIM13-208ENST00000478111 CMPK1P30085 196 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 SOX11P35716 441 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 KCNJ1P48048 391 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 BASP1P80723 227 aaKnown RBP15.9■□□□□ 0.14
TRIM13-208ENST00000478111 RPS6KA1Q15418 735 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 HKDC1Q2TB90 917 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 ACSBG2Q5FVE4 666 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 ZNF324BQ6AW86 544 aaPredicted RBP15.9■□□□□ 0.14
TRIM13-208ENST00000478111 C4orf22Q6V702 233 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 NDUFAF7Q7L592 441 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 PAQR7Q86WK9 346 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 TICAM1Q8IUC6 712 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 SPNS2Q8IVW8 549 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 OR2A5Q96R48 311 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 TCF12Q99081 682 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 PLCD4Q9BRC7 762 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 SOX13Q9UN79 622 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 RUVBL1Q9Y265 456 aaKnown RBP15.9■□□□□ 0.14
TRIM13-208ENST00000478111 CRYL1Q9Y2S2 319 aa15.9■□□□□ 0.14
TRIM13-208ENST00000478111 SCN3AQ9NY46 2000 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 AP3B1O00203 1094 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 FFAR3O14843 346 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 GPR42O15529 346 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 ESR1P03372 595 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 PRR35P0CG20 571 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 TPSB2P20231 275 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 FBLP22087 321 aaKnown RBP15.89■□□□□ 0.13
TRIM13-208ENST00000478111 CDC25BP30305 580 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 SLC26A3P40879 764 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 EFNA3P52797 238 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 DSG2Q14126 1118 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 TPSAB1Q15661 275 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 KLHL38Q2WGJ6 581 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 ANKRD20A4Q4UJ75 823 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 C1QL3Q5VWW1 255 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 ZNF425Q6IV72 752 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 MRNIPQ6NTE8 343 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 CENPUQ71F23 418 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 SDCCAG8Q86SQ7 713 aaPredicted RBP15.89■□□□□ 0.13
TRIM13-208ENST00000478111 KBTBD2Q8IY47 623 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 OTUD6BQ8N6M0 293 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 AMER3Q8N944 861 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 SPC24Q8NBT2 197 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 OR1N1Q8NGS0 311 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 SMPDL3AQ92484 453 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 CABS1Q96KC9 395 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 TAAR6Q96RI8 345 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 PKP4Q99569 1192 aa15.89■□□□□ 0.13
TRIM13-208ENST00000478111 IGHV1-45A0A0A0MS14 117 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 NSG1A0A0A6YYJ2 146 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 IDSB3KWA1 339 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 H3BMM5 538 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 FOXS1O43638 330 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 USP1O94782 785 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 CELA2AP08217 269 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 STSP08842 583 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 CHRM3P20309 590 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 TNFSF10P50591 281 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 TDGF1P3P51864 188 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 EMP2P54851 167 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 SNRPNP63162 240 aaKnown RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 PRDX1Q06830 199 aaKnown RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 ARHGAP19Q14CB8 494 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 NAA25Q14CX7 972 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 ZRSR2Q15696 482 aaKnown RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 RNF187Q5TA31 235 aaPredicted RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 KIAA0930Q6ICG6 404 aaPredicted RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 BRIX1Q8TDN6 353 aaKnown RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 MVB12AQ96EY5 273 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 SLC30A3Q99726 388 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 TGIF2Q9GZN2 237 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 MRPS30Q9NP92 439 aaKnown RBP15.88■□□□□ 0.13
TRIM13-208ENST00000478111 PLA2G3Q9NZ20 509 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 PTGFRNQ9P2B2 879 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 TRPC4Q9UBN4 977 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 CDC14AQ9UNH5 594 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 ZKSCAN5Q9Y2L8 839 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 MED16Q9Y2X0 877 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 CSMD2Q7Z408 3487 aa15.88■□□□□ 0.13
TRIM13-208ENST00000478111 PHF2O75151 1096 aa15.87■□□□□ 0.13
TRIM13-208ENST00000478111 AVILO75366 819 aa15.87■□□□□ 0.13
TRIM13-208ENST00000478111 FGGP02679 453 aa15.87■□□□□ 0.13
TRIM13-208ENST00000478111 SERPINA7P05543 415 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms