RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PIK3CGP48736 1102 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ALDH7A1P49419 539 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CDK9P50750 372 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ERVPABLB-1P60509 514 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ESRRGP62508 458 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PLOD1Q02809 727 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 BCL2L1Q07817 233 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TWF1Q12792 350 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 MERTKQ12866 999 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TRAF3Q13114 568 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GK3PQ14409 553 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SSPNQ14714 243 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GPNMBQ14956 572 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CYP51A1Q16850 503 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TTLL9Q3SXZ7 439 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GPR33Q49SQ1 333 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PAGE3Q5JUK9 113 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CDKL4Q5MAI5 379 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FAM219BQ5XKK7 198 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GRAMD4Q6IC98 578 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SULT1C3Q6IMI6 304 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 KIAA1841Q6NSI8 718 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 NANOGP8Q6NSW7 305 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CYP20A1Q6UW02 462 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 IL27RAQ6UWB1 636 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SBSNQ6UWP8 590 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 Q6ZSR9 355 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GOLGA7Q7Z5G4 137 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SNX20Q7Z614 316 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 MILR1Q7Z6M3 343 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CDH24Q86UP0 819 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SERPINA9Q86WD7 417 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM173Q86WV6 379 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 EPHX4Q8IUS5 362 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 LURAP1LQ8IV03 231 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FAM217AQ8IXS0 508 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CMTR2Q8IYT2 770 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PHACTR4Q8IZ21 702 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FAM9CQ8IZT9 166 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CBARPQ8N350 705 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SFRP1Q8N474 314 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CBR4Q8N4T8 237 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FIBCD1Q8N539 461 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 DHRSXQ8N5I4 330 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CDYL2Q8N8U2 506 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TERB1Q8NA31 727 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FAM47BQ8NA70 645 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GLB1L3Q8NCI6 653 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR4F6Q8NGB9 312 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR8J3Q8NGG0 315 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR2T11Q8NH01 316 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ZFP28Q8NHY6 868 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF461Q8TAF7 563 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 DNAJB14Q8TBM8 379 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PROKR1Q8TCW9 393 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 UBTD2Q8WUN7 234 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PIH1D2Q8WWB5 315 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 KLHL6Q8WZ60 621 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 POP5Q969H6 163 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GFM2Q969S9 779 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 VPS33AQ96AX1 596 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ISG20Q96AZ6 181 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 IGSF21Q96ID5 467 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 NSMCE2Q96MF7 247 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 PLEKHG4BQ96PX9 1271 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SMIM14Q96QK8 99 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ACOX2Q99424 681 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FEM1AQ9BSK4 669 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 BDH2Q9BUT1 245 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 C1orf50Q9BV19 199 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ADI1Q9BV57 179 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 YTHDF1Q9BYJ9 559 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ASB8Q9H765 288 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CAAP1Q9H8G2 361 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 NANOGQ9H9S0 305 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RDH14Q9HBH5 336 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GCM1Q9NP62 436 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SARS2Q9NP81 518 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GKN1Q9NS71 199 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OLAHQ9NV23 265 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ASIC5Q9NY37 505 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 WWOXQ9NZC7 414 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RSL24D1Q9UHA3 163 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TRPS1Q9UHF7 1281 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 VPS51Q9UID3 782 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 LSM7Q9UK45 103 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 MAFFQ9ULX9 164 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 EIF3LQ9Y262 564 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ANGPTL3Q9Y5C1 460 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR51B4Q9Y5P0 310 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 IRAK3Q9Y616 596 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 MTCH2Q9Y6C9 303 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms