RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 C15orf39Q6ZRI6 1047 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ADGRF2Q8IZF7 708 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ACVR1CQ8NER5 493 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 RDM1Q8NG50 284 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 OR6J1Q8NGC5 347 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 MRPS27Q92552 414 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 EGLN2Q96KS0 407 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 AK8Q96MA6 479 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 CCDC43Q96MW1 224 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 SPATA33Q96N06 139 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 MTMR9Q96QG7 549 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 C1QTNF1Q9BXJ1 281 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 AZI2Q9H6S1 392 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SLC28A3Q9HAS3 691 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SEBOXQ9HB31 216 aaPredicted RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 KCNMB3Q9NPA1 279 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SEPT11Q9NVA2 429 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 TRMT1Q9NXH9 659 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 FBXO2Q9UK22 296 aaPredicted RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 DLGAP4Q9Y2H0 992 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 DDX49Q9Y6V7 483 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 A0A1B0GVL5 298 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 C1orf226A1L170 272 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 MAP2K7O14733 419 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SMAD9O15198 467 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 PCDH7O60245 1069 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CIDEAO60543 219 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 KINO60870 393 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 ATP9AO75110 1047 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CAVIN2O95810 425 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CYBAP13498 195 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 MUTP22033 750 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CMA1P23946 247 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 PPARGP37231 505 aaPredicted RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 DCTP40126 519 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 PIK3CAP42336 1068 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SYKP43405 635 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 TAS2R38P59533 333 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 PSMC5P62195 406 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ITGB3BPQ13352 177 aaPredicted RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 PPP2R5CQ13362 524 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZNF234Q14588 700 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 PKN2Q16513 984 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZNF805Q5CZA5 627 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SPECC1Q5M775 1068 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CELF3Q5SZQ8 465 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 RARS2Q5T160 578 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZC2HC1BQ5TFG8 222 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 RESP18Q5W5W9 173 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ACSM2BQ68CK6 577 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 METTL7BQ6UX53 244 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CFAP77Q6ZQR2 320 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 TLK2Q86UE8 772 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CEP57L1Q8IYX8 460 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 WDTC1Q8N5D0 677 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 C4orf32Q8N8J7 132 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SLC38A9Q8NBW4 561 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SLC38A5Q8WUX1 472 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SEPT1Q8WYJ6 367 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 TM9SF4Q92544 642 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ATP6V0A1Q93050 837 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SYAP1Q96A49 352 aaPredicted RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 TIGD1Q96MW7 591 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZNF599Q96NL3 588 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 QRFPRQ96P65 431 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 PANK2Q9BZ23 570 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 CCSER1Q9C0I3 900 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 NT5C3AQ9H0P0 336 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 TFB2MQ9H5Q4 396 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 SYNCQ9H7C4 482 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 EPB41L5Q9HCM4 733 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 TUFT1Q9NNX1 390 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZNF302Q9NR11 478 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 EIF2B3Q9NR50 452 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 COPG2Q9UBF2 871 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 HOOK1Q9UJC3 728 aaKnown RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 ZNF215Q9UL58 517 aaPredicted RBP3.77□□□□□ -1.81
UBR3-209ENST00000477461 KLHL20Q9Y2M5 609 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 SMAD5-AS1Q9Y6J3 95 aa3.77□□□□□ -1.81
UBR3-209ENST00000477461 IGLV5-45A0A087WSX0 123 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 ARHGEF35A5YM69 484 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 PP2D1A8MPX8 630 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 HHLA1C9JL84 531 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 KBTBD13C9JR72 458 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 HS3ST1O14792 307 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 POLR2DO15514 142 aaKnown RBP3.76□□□□□ -1.81
UBR3-209ENST00000477461 ZNF500O60304 480 aaPredicted RBP3.76□□□□□ -1.81
UBR3-209ENST00000477461 DOK2O60496 412 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 DUSP11O75319 330 aaKnown RBP3.76□□□□□ -1.81
UBR3-209ENST00000477461 CRLF1O75462 422 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 CCNE2O96020 404 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 SUPT20HL2P0C7V6 817 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 PFKFB1P16118 471 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 POLR2CP19387 275 aaPredicted RBP3.76□□□□□ -1.81
UBR3-209ENST00000477461 RPA1P27694 616 aa3.76□□□□□ -1.81
UBR3-209ENST00000477461 CCND3P30281 292 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms