RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CTSL3PQ5NE16 218 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 OR2T5Q6IEZ7 315 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 SLC8B1Q6J4K2 584 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 AMZ2Q86W34 360 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 ARMC8Q8IUR7 673 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 POC5Q8NA72 575 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 OR2T29Q8NH02 315 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 HM13Q8TCT9 377 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 PROKR1Q8TCW9 393 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 LKAAEAR1Q8TD35 194 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 MAL2Q969L2 176 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 APIPQ96GX9 242 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CEP44Q9C0F1 390 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM181Q9P2C4 612 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 A0A1W2PRB8 838 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 SOCS5O75159 536 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 SLC16A8O95907 504 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 PTNP21246 168 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 MAGEA12P43365 314 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 ALDH3A2P51648 485 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 FOXM1Q08050 763 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 ELP6Q0PNE2 266 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 C16orf62Q7Z3J2 963 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 C7orf61Q8IZ16 206 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 OR5K1Q8NHB7 308 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 HTRA1Q92743 480 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 RAB8BQ92930 207 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM125Q96AQ2 219 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 CXorf40BQ96DE9 158 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 SPACA7Q96KW9 195 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 C12orf66Q96MD2 445 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 QRFPRQ96P65 431 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 SLC35A5Q9BS91 424 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 INPP5KQ9BT40 448 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 SLC7A5P2Q9GIP4 190 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 TUBB1Q9H4B7 451 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 C11orf16Q9NQ32 467 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 MAP10Q9P2G4 905 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 ASB1Q9Y576 335 aa10.71□□□□□ -0.7
COL27A1-204ENST00000477421 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.7
COL27A1-204ENST00000477421 LOC100130705A0A1B0GUX0 176 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 RTCAO00442 366 aaKnown RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PAK4O96013 591 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TNFRSF1BP20333 461 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 VIPR1P32241 457 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 HNMTP50135 292 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 INHBCP55103 352 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 DOC2AQ14183 400 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 AAK1Q2M2I8 961 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ZBED5Q49AG3 693 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ARMC4Q5T2S8 1044 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ERICH5Q6P6B1 374 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 UGT2A3Q6UWM9 527 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PARGQ86W56 976 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TICAM1Q8IUC6 712 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SLC43A3Q8NBI5 491 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 MTERF3Q96E29 417 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SCRN2Q96FV2 425 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TRMT61BQ9BVS5 477 aaKnown RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 FNDC11Q9BVV2 318 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SLC46A2Q9BY10 475 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 PREBQ9HCU5 417 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SPHK2Q9NRA0 654 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SELENONQ9NZV5 590 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 EBF1Q9UH73 591 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ACSL6Q9UKU0 697 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 KCNK6Q9Y257 313 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TSC22D4Q9Y3Q8 395 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 OARD1Q9Y530 152 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 INSL6Q9Y581 213 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 EFCAB10A6NFE3 127 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 LATO43561 262 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 DENRO43583 198 aaKnown RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 NDUFS2O75306 463 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 EEDO75530 441 aaKnown RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 MED26O95402 600 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 NFATC1O95644 943 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 IGLV3-25P01717 112 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ITGA2P17301 1181 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 HOXC13P31276 330 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TM4SF4P48230 202 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 NPTX1Q15818 432 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 EGFLAMQ63HQ2 1017 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ATG14Q6ZNE5 492 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 TFGQ92734 400 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 RELTQ969Z4 430 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 HSH2DQ96JZ2 352 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 ZSCAN5AQ9BUG6 496 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-204ENST00000477421 EHD3Q9NZN3 535 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 SIPA1L1O43166 1804 aa10.7□□□□□ -0.7
COL27A1-204ENST00000477421 CROCCQ5TZA2 2017 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms