RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ZMIZ2Q8NF64 920 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 SMARCD1Q96GM5 515 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 WDFY2Q96P53 400 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 SIK2Q9H0K1 926 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 CLMPQ9H6B4 373 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 NIPAL2Q9H841 368 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 PDP1Q9P0J1 537 aaPredicted RBP14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 GALPQ9UBC7 116 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 SNX7Q9UNH6 387 aa14.84□□□□□ -0.03
CLSTN1-205ENST00000477264 CDC7O00311 574 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 RGS14O43566 566 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 PEX11BO96011 259 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 SEMG1P04279 462 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 PGRP06401 933 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CAPN1P07384 714 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 MMP2P08253 660 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ADORA3P0DMS8 318 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 RGS6P49758 472 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ITGA1P56199 1179 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 EIF4EBP2Q13542 120 aaPredicted RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CAMK2GQ13555 558 aaPredicted RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■□□□□ 10.9
CLSTN1-205ENST00000477264 MARC1Q5VT66 337 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 LETMD1Q6P1Q0 360 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 GLB1LQ6UWU2 654 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ZSWIM9Q86XI8 627 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ATG16L2Q8NAA4 619 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CHTF18Q8WVB6 975 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 KCNH6Q9H252 994 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CRTAC1Q9NQ79 661 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 PLSCR3Q9NRY6 295 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 RASSF1Q9NS23 344 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CD274Q9NZQ7 290 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 SPASTQ9UBP0 616 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 AASSQ9UDR5 926 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 PCDHB5Q9Y5E4 795 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 MYO1GB0I1T2 1018 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 SLC28A1O00337 649 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CCL22O00626 93 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 VPS26AO75436 327 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 GNPDA1P46926 289 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 RFX2P48378 723 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 LHX1P48742 406 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 HTR6P50406 440 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 GPLD1P80108 840 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CSTF3Q12996 717 aaKnown RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ASAH1Q13510 395 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 RTN4RL1Q86UN2 441 aaPredicted RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CCDC71Q8IV32 467 aaPredicted RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 TMEM86AQ8N2M4 240 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 CADM2Q8N3J6 435 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 NACC2Q96BF6 587 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 Q96MT0 163 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 TMEM245Q9H330 911 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 REEP1Q9H902 201 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 KLHL21Q9UJP4 597 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 IKZF3Q9UKT9 509 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 AGO1Q9UL18 857 aaKnown RBP14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 GPSM3Q9Y4H4 160 aa14.83□□□□□ -0.04
CLSTN1-205ENST00000477264 UBA6A0AVT1 1052 aaPredicted RBP14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 CASTOR2A6NHX0 329 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 TLL1O43897 1013 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 NBNO60934 754 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 PAGE1O75459 146 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 OTCP00480 354 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 C9P02748 559 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 ALPPP05187 535 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 GGT2P36268 569 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 IL12RB1P42701 662 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 LBX1P52954 281 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 RPL38P63173 70 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 ITKQ08881 620 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 HSPA14Q0VDF9 509 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 IRF3Q14653 427 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 CDONQ4KMG0 1287 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 C19orf48Q6RUI8 117 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 FAM9CQ8IZT9 166 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 TEX26Q8N6G2 289 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 LSMEM1Q8N8F7 131 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 PNPLA1Q8N8W4 532 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 DBF4BQ8NFT6 615 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 EPYCQ99645 322 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 BARD1Q99728 777 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 COQ7Q99807 217 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 OR51E2Q9H255 320 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 C14orf119Q9NWQ9 140 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 UXTQ9UBK9 157 aaPredicted RBP14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 ABCG2Q9UNQ0 655 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 SAMHD1Q9Y3Z3 626 aaKnown RBP14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 PCDHGA6Q9Y5G7 932 aa14.82□□□□□ -0.04
CLSTN1-205ENST00000477264 SLC35F4A4IF30 521 aa14.81□□□□□ -0.04
CLSTN1-205ENST00000477264 CCDC182A6NF36 153 aa14.81□□□□□ -0.04
CLSTN1-205ENST00000477264 ENPP3O14638 875 aa14.81□□□□□ -0.04
CLSTN1-205ENST00000477264 TEX28O15482 410 aa14.81□□□□□ -0.04
CLSTN1-205ENST00000477264 ZNF780AO75290 641 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms