RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 GOLGA8TH3BQL2 631 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 NR5A2O00482 541 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CXCL11O14625 94 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 IFIT3O14879 490 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 PER2O15055 1255 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CLDN3O15551 220 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 FFAR2O15552 330 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GUCY1B2O75343 617 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ZNF821O75541 412 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 CRTAPO75718 401 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 CCNDBP1O95273 360 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GCNT3O95395 438 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 OPN1LWP04000 364 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 INHBAP08476 426 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8HP0CJ92 632 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CALM1P0DP23 149 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CALM2P0DP24 149 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CALM3P0DP25 149 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RALAP11233 206 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PRPS2P11908 318 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PRKACAP17612 351 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 EEF1DP29692 281 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 MAGEA4P43358 317 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 STARP49675 285 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GNAQP50148 359 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SERPINB8P50452 374 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CLCNKAP51800 687 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PNLIPRP1P54315 467 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RAD23AP54725 363 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PRRX1P54821 245 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MFAP3P55082 362 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CASP6P55212 293 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 EIF3EP60228 445 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 GMFBP60983 142 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ISL1P61371 349 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TRA2BP62995 288 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 ARF5P84085 180 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TLE2Q04725 743 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 LIPEQ05469 1076 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 LGALS3BPQ08380 585 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CDC20Q12834 499 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RALGDSQ12967 914 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DYNC1I2Q13409 638 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 XRCC4Q13426 336 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 KCNC3Q14003 757 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DMC1Q14565 340 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SGCAQ16586 387 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 KYNUQ16719 465 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 PFKFB4Q16877 469 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 KLHL38Q2WGJ6 581 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CDONQ4KMG0 1287 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 HSP90AA5PQ58FG0 334 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 XKR6Q5GH73 641 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SIRPB2Q5JXA9 342 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 LIN9Q5TKA1 542 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GKAP1Q5VSY0 366 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 IL23RQ5VWK5 629 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SPECC1LQ69YQ0 1117 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SULT6B1Q6IMI4 303 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GJB7Q6PEY0 223 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DEGS2Q6QHC5 323 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ISLR2Q6UXK2 745 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 IL20RBQ6UXL0 311 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SLC36A4Q6YBV0 504 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MACC1Q6ZN28 852 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RABEPKQ7Z6M1 372 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ADGRG6Q86SQ4 1221 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 LRRC6Q86X45 466 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 DNAAF5Q86Y56 855 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MCEMP1Q8IX19 187 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 HACE1Q8IYU2 909 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ZNF34Q8IZ26 560 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 RNF113BQ8IZP6 322 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 CCNYL1Q8N7R7 359 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 STPG4Q8N801 248 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ANKFN1Q8N957 763 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MRPL43Q8N983 215 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 ZNF527Q8NB42 609 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ATAD1Q8NBU5 361 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GJC3Q8NFK1 279 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TTLQ8NG68 377 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CLHC1Q8NHS4 586 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 GANCQ8TET4 914 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 FAM222BQ8WU58 562 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ABTB1Q969K4 478 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 RAD51AP1Q96B01 352 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ZNF653Q96CK0 615 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ZNF689Q96CS4 500 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 LRRC39Q96DD0 335 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 SPDL1Q96EA4 605 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 STAMBPL1Q96FJ0 436 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MASTLQ96GX5 879 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 ST6GAL2Q96JF0 529 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 MLPHQ9BV36 600 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 CARD6Q9BX69 1037 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 NPLQ9BXD5 320 aaPredicted RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 FUT8Q9BYC5 575 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 CRNKL1Q9BZJ0 848 aaKnown RBP2.4□□□□□ -2.03
XRN1-211ENST00000477237 SHCBP1LQ9BZQ2 653 aa2.4□□□□□ -2.03
XRN1-211ENST00000477237 TRIM15Q9C019 465 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms