RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RIPOR1Q6ZS17 1223 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 VN1R5Q7Z5H4 357 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 ZFAND4Q86XD8 727 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 LAS2Q8IYD9 372 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 MAML2Q8IZL2 1156 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-206ENST00000477085 HUS1BQ8NHY5 278 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 FAM174AQ8TBP5 190 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 PROKR1Q8TCW9 393 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 CLPTM1LQ96KA5 538 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 HAUS8Q9BT25 410 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 IER2Q9BTL4 223 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 LRRC61Q9BV99 259 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 SLC40A1Q9NP59 571 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 C1orf109Q9NX04 203 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 POLR3HQ9Y535 204 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-206ENST00000477085 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.93□□□□□ -0.18
COL4A6-206ENST00000477085 COLEC10Q9Y6Z7 277 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 A8MUI8 341 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
COL4A6-206ENST00000477085 CAPN3P20807 821 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 HOXA6P31267 233 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 STX1BP61266 288 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 GRIK2Q13002 908 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 DDX39BQ13838 428 aaKnown RBP13.92□□□□□ -0.18
COL4A6-206ENST00000477085 SF1Q15637 639 aaKnown RBP13.92□□□□□ -0.18
COL4A6-206ENST00000477085 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
COL4A6-206ENST00000477085 MED27Q6P2C8 311 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 BLOC1S3Q6QNY0 202 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 CYP20A1Q6UW02 462 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 ARMCX6Q7L4S7 300 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 RETREG3Q86VR2 466 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 ABCA7Q8IZY2 2146 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 OR4E2Q8NGC2 313 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 DNASE2BQ8WZ79 361 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 SPACA7Q96KW9 195 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL4A6-206ENST00000477085 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 DLGAP4Q9Y2H0 992 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 PCDHGA11Q9Y5H2 935 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 HEBP2Q9Y5Z4 205 aa13.92□□□□□ -0.18
COL4A6-206ENST00000477085 ASPDHA6ND91 283 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 H7BY64 318 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 NRP2O60462 931 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 SH3BGRLO75368 114 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 SLC22A3O75751 556 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 TBX6O95947 436 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 CSF2P04141 144 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PCNAP12004 261 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 JUNDP17535 347 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 AMD1P17707 334 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 MNAT1P51948 309 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ELF3P78545 371 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 MXRA7P84157 204 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 SRSF5Q13243 272 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PTGR1Q14914 329 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 SMU1Q2TAY7 513 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 VPS26BQ4G0F5 336 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PRRT3Q5FWE3 981 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 IQCHQ86VS3 1027 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 C17orf64Q86WR6 236 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 DCP2Q8IU60 420 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 NAGSQ8N159 534 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 OR4K1Q8NGD4 311 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 SH3KBP1Q96B97 665 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PRAP1Q96NZ9 151 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 EFCAB11Q9BUY7 163 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 GSDMCQ9BYG8 508 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 TWSG1Q9GZX9 223 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 DUSP15Q9H1R2 295 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PRMT8Q9NR22 394 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 MRGBPQ9NV56 204 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 NOP53Q9NZM5 478 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 LAMA1P25391 3075 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 A0A088AWK7 358 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ZNF839A8K0R7 811 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 BTN3A3O00478 584 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 RASSF9O75901 435 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 BCKDHAP12694 445 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 TACR1P25103 407 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 DPP6P42658 865 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 CSNK1EP49674 416 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 NUDT2P50583 147 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 RPS13P62277 151 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 UBE2IP63279 158 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ZNF33BQ06732 778 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 PRDX1Q06830 199 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 TBL3Q12788 808 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 RPS6KA2Q15349 733 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ICE2Q659A1 982 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 REP15Q6BDI9 236 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 TAF8Q7Z7C8 310 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 AMIGO1Q86WK6 493 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 LIX1Q8N485 282 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms