RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 CXCL10P02778 98 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 CHRM2P08172 466 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 ZNF18P17022 549 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 LBPP18428 481 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 NMBRP28336 390 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 RGS7P49802 495 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 SMSP52788 366 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 FOXL1Q12952 345 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 LARS2Q15031 903 aaKnown RBP6.6□□□□□ -1.35
LRCH3-215ENST00000476664 RNASE12Q5GAN4 147 aaKnown RBP6.6□□□□□ -1.35
LRCH3-215ENST00000476664 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 HIST2H2BDQ6DRA6 164 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 VWA1Q6PCB0 445 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 RNF207Q6ZRF8 634 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 DCDC5Q6ZRR9 648 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 TPRG1Q6ZUI0 275 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 CCDC25Q86WR0 208 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 AMER3Q8N944 861 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 LEMD2Q8NC56 503 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 OR1J2Q8NGS2 313 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 GPT2Q8TD30 523 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 FIG4Q92562 907 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 MOB3AQ96BX8 217 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 PTCD3Q96EY7 689 aaKnown RBP6.6□□□□□ -1.35
LRCH3-215ENST00000476664 SFXN2Q96NB2 322 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 THAP7Q9BT49 309 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-215ENST00000476664 RAB33BQ9H082 229 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 TSPYL1Q9H0U9 437 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 ADAMTS5Q9UNA0 930 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 MAP3K2Q9Y2U5 619 aa6.6□□□□□ -1.35
LRCH3-215ENST00000476664 HECTD1Q9ULT8 2610 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 XKRY2A2RUG3 117 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 C17orf102A2RUQ5 167 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 DDTLA6NHG4 134 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 DUXAA6NLW8 204 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 FOXO6A8MYZ6 492 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 MAGEB2O15479 319 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 AP5Z1O43299 807 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 NFATC1O95644 943 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 MT-CO3P00414 261 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 LCKP06239 509 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 TFPIP10646 304 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 SKILP12757 684 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 EIF2S2P20042 333 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PSMB4P28070 264 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PKLRP30613 574 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 GABRA5P31644 462 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 SCNN1GP51170 649 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 MFAP3P55082 362 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 POLR2LP62875 67 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 DDX39BQ13838 428 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PTPRRQ15256 657 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 STXBP2Q15833 593 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 FKBP1CQ5VVH2 108 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 ARHGAP17Q68EM7 881 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 TMEM65Q6PI78 240 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 FIGLAQ6QHK4 219 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PRR23BQ6ZRT6 265 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 IRF2BP2Q7Z5L9 587 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 TRIM74Q86UV6 250 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 TRIM73Q86UV7 250 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 DCLK2Q8N568 766 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PARP16Q8N5Y8 322 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 TMEM105Q8N8V8 129 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PAPD5Q8NDF8 572 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 MCPH1Q8NEM0 835 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 HM13Q8TCT9 377 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 ANKRD49Q8WVL7 239 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 KAT2BQ92831 832 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 RFKQ969G6 155 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 FUBP1Q96AE4 644 aaKnown RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 LINGO1Q96FE5 620 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 P2RY11Q96G91 374 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 SPATA33Q96N06 139 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PLIN2Q99541 437 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 ASCL2Q99929 193 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 ZNF416Q9BWM5 594 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 RAD21L1Q9H4I0 556 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 MAGEF1Q9HAY2 307 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 GPR108Q9NPR9 543 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 DBF4Q9UBU7 674 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-215ENST00000476664 STK39Q9UEW8 545 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PLA2G4CQ9UP65 541 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 NAALAD2Q9Y3Q0 740 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 SLC30A1Q9Y6M5 507 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 IGF2RP11717 2491 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PIEZO2Q9H5I5 2752 aa6.59□□□□□ -1.35
LRCH3-215ENST00000476664 PTPN13Q12923 2485 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 SIP14410 1827 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 C15orf38-AP3S2A0A0A6YYH1 394 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 A0A1W2PPW3 197 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 WDR27A2RRH5 827 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 ANKUB1A6NFN9 424 aa6.58□□□□□ -1.36
LRCH3-215ENST00000476664 SSX4O60224 188 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms