RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TAC3Q9UHF0 121 aa10.31□□□□□ -0.76
SEC13-214ENST00000476597 PCYOX1Q9UHG3 505 aa10.31□□□□□ -0.76
SEC13-214ENST00000476597 NXT1Q9UKK6 140 aaKnown RBP10.31□□□□□ -0.76
SEC13-214ENST00000476597 VPS4AQ9UN37 437 aa10.31□□□□□ -0.76
SEC13-214ENST00000476597 HS3ST3B1Q9Y662 390 aa10.31□□□□□ -0.76
SEC13-214ENST00000476597 MAU2Q9Y6X3 613 aa10.31□□□□□ -0.76
SEC13-214ENST00000476597 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 EIF3FO00303 357 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 SOCS6O14544 535 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 VPS26AO75436 327 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 TTC4O95801 387 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 TCP1P17987 556 aaKnown RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 IVDP26440 423 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 GABRB3P28472 473 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 ABATP80404 500 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 DHX9Q08211 1270 aaKnown RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 AIMP2Q13155 320 aaKnown RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 PTK6Q13882 451 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 CRYMQ14894 314 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 MUM1Q2TAK8 710 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 PLEKHN1Q494U1 663 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 SLC6A19Q695T7 634 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 KIRREL2Q6UWL6 708 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 PCGF5Q86SE9 256 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 KCNMB4Q86W47 210 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 FAM26EQ8N5C1 309 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 METTL27Q8N6F8 245 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 C2CD4AQ8NCU7 369 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 PPFIBP2Q8ND30 876 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 STT3BQ8TCJ2 826 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 COL26A1Q96A83 441 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 FAM167BQ9BTA0 163 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 NAT9Q9BTE0 207 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 SOX17Q9H6I2 414 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 SYNPO2LQ9H987 977 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 SEMA3GQ9NS98 782 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 STOX2Q9P2F5 926 aaPredicted RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 CTSFQ9UBX1 484 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 ASIC3Q9UHC3 531 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 CDC23Q9UJX2 597 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 SPTAN1Q13813 2472 aaKnown RBP10.3□□□□□ -0.76
SEC13-214ENST00000476597 NBPF19A0A087WUL8 3843 aa10.3□□□□□ -0.76
SEC13-214ENST00000476597 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 SMAPO00193 183 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 IPO13O94829 963 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 CCNDBP1O95273 360 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 SYF2O95926 243 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 AHSGP02765 367 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 ALPPP05187 535 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 ZGLP1P0C6A0 271 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 ERVK-10P10266 1014 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 IMPA1P29218 277 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 KLC1Q07866 573 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 TSTA3Q13630 321 aaPredicted RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 SPANXN3Q5MJ09 141 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 PRAMEF13Q5VWM6 474 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 UGT3A1Q6NUS8 523 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 SHISA6Q6ZSJ9 500 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 UBE2R2Q712K3 238 aaPredicted RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 PIWIL4Q7Z3Z4 852 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 CREG2Q8IUH2 290 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 IGDCC3Q8IVU1 814 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 CNTN4Q8IWV2 1026 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 CPNE9Q8IYJ1 553 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 ARHGEF39Q8N4T4 335 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 EEF1AKMT1Q8WVE0 214 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 MIEF2Q96C03 454 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 MVB12AQ96EY5 273 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 C10orf90Q96M02 699 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 ZBTB20Q9HC78 741 aaPredicted RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 UTP6Q9NYH9 597 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 ZNF282Q9UDV7 671 aaPredicted RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 TRMT6Q9UJA5 497 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 FBXL4Q9UKA2 621 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 CDC14AQ9UNH5 594 aa10.29□□□□□ -0.76
SEC13-214ENST00000476597 RUVBL1Q9Y265 456 aaKnown RBP10.29□□□□□ -0.76
SEC13-214ENST00000476597 USP27XA6NNY8 438 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 H7BY64 318 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 TXNDC9O14530 226 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 BANF1O75531 89 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 EZRP15311 586 aaKnown RBP10.28□□□□□ -0.76
SEC13-214ENST00000476597 GNLYP22749 145 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 HRH2P25021 359 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 ITGA3P26006 1051 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 SLC26A3P40879 764 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 UQCRFS1P47985 274 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CARSP49589 748 aaKnown RBP10.28□□□□□ -0.76
SEC13-214ENST00000476597 OCA2Q04671 838 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 RBBP7Q16576 425 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 HKDC1Q2TB90 917 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 BBS9Q3SYG4 887 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 VWA2Q5GFL6 755 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 CRB2Q5IJ48 1285 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 TEDDM1Q5T9Z0 273 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 GARNL3Q5VVW2 1013 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 ATG9BQ674R7 924 aa10.28□□□□□ -0.76
SEC13-214ENST00000476597 LRRC8EQ6NSJ5 796 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms