RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PTRH1Q86Y79 214 aaKnown RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 MYO1HQ8N1T3 1032 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 TTC29Q8NA56 475 aaPredicted RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 FAM45AQ8TCE6 357 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 MCOLN3Q8TDD5 553 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 ZFYVE21Q9BQ24 234 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 C17orf62Q9BQA9 187 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 PARVBQ9HBI1 364 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 CUEDC1Q9NWM3 386 aaPredicted RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 ANKMY1Q9P2S6 941 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 NDOR1Q9UHB4 597 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 GPN3Q9UHW5 284 aaPredicted RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 IKZF3Q9UKT9 509 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 H0YGG7 62 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 SLC16A5O15375 505 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 ONECUT2O95948 504 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 NR1D1P20393 614 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 SSTR1P30872 391 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 IL2P60568 153 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 ARF3P61204 181 aaPredicted RBP20.23■□□□□ 0.83
LIME1-204ENST00000476183 SP140Q13342 867 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 NAA25Q14CX7 972 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 YOD1Q5VVQ6 348 aaPredicted RBP20.23■□□□□ 0.83
LIME1-204ENST00000476183 COX15Q7KZN9 410 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 PYROXD1Q8WU10 500 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 CCDC138Q96M89 665 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 SPENQ96T58 3664 aaKnown RBP20.23■□□□□ 0.83
LIME1-204ENST00000476183 MCMBPQ9BTE3 642 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 PADI2Q9Y2J8 665 aa20.23■□□□□ 0.83
LIME1-204ENST00000476183 PTRH2Q9Y3E5 179 aaKnown RBP20.23■□□□□ 0.83
LIME1-204ENST00000476183 EIF3HO15372 352 aaKnown RBP eCLIP20.22■□□□□ 0.83
LIME1-204ENST00000476183 SLC28A2O43868 658 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 CCNDBP1O95273 360 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 EIF2S1P05198 315 aaKnown RBP20.22■□□□□ 0.83
LIME1-204ENST00000476183 PLTPP55058 493 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 TBPL1P62380 186 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ABATP80404 500 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ATP1A4Q13733 1029 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ZXDCQ2QGD7 858 aaPredicted RBP20.22■□□□□ 0.83
LIME1-204ENST00000476183 THEMIS2Q5TEJ8 643 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ZDHHC24Q6UX98 284 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 PRICKLE2Q7Z3G6 844 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 SLC26A11Q86WA9 606 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 PALM2Q8IXS6 379 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 METTL27Q8N6F8 245 aaPredicted RBP20.22■□□□□ 0.83
LIME1-204ENST00000476183 OR2Y1Q8NGV0 311 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ATG10Q9H0Y0 220 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 ING2Q9H160 280 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 CDC23Q9UJX2 597 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 SH2B3Q9UQQ2 575 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 TP53TG5Q9Y2B4 290 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 UTP11Q9Y3A2 253 aaKnown RBP20.22■□□□□ 0.83
LIME1-204ENST00000476183 HEMK1Q9Y5R4 338 aaPredicted RBP20.22■□□□□ 0.83
LIME1-204ENST00000476183 TENM4Q6N022 2769 aa20.22■□□□□ 0.83
LIME1-204ENST00000476183 FAM95CA0A1B0GW59 222 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 HYKKA2RU49 373 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 CXorf49A8MYA2 514 aaPredicted RBP20.21■□□□□ 0.83
LIME1-204ENST00000476183 MKRN2OSH3BPM6 223 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 HAT1O14929 419 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 SUV39H1O43463 412 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 UMODP07911 640 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 SAT1P21673 171 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 OTX2P32243 289 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 OR1D4P47884 311 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 ZNF460Q14592 562 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 PRTGQ2VWP7 1150 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 FAM214AQ32MH5 1076 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 LACTB2Q53H82 288 aaPredicted RBP20.21■□□□□ 0.83
LIME1-204ENST00000476183 AGTRAPQ6RW13 159 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 PLD3Q8IV08 490 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 FBXO25Q8TCJ0 367 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 C10orf90Q96M02 699 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 OR2A5Q96R48 311 aa20.21■□□□□ 0.83
LIME1-204ENST00000476183 CCDC177Q9NQR7 707 aaPredicted RBP20.21■□□□□ 0.83
LIME1-204ENST00000476183 TNRC6AQ8NDV7 1962 aaKnown RBP20.21■□□□□ 0.83
LIME1-204ENST00000476183 H7BY64 318 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 PDGFAP04085 211 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 ZNF37AP17032 561 aaPredicted RBP20.2■□□□□ 0.82
LIME1-204ENST00000476183 FOLR3P41439 243 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 TAS2R39P59534 338 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 GPX6P59796 221 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 NAE1Q13564 534 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 SSPNQ14714 243 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 PRAMEF13Q5VWM6 474 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 TCTN3Q6NUS6 607 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 OVCH1Q7RTY7 1134 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 ADCK2Q7Z695 626 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 MRGPREQ86SM8 312 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 FKBP10Q96AY3 582 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 PRAP1Q96NZ9 151 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 RAB17Q9H0T7 212 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 RHOJQ9H4E5 214 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 MAU2Q9Y6X3 613 aa20.2■□□□□ 0.82
LIME1-204ENST00000476183 TCRBV9S1A1TA0A576 114 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 PYCARD-AS1I3L0S3 204 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 URI1O94763 535 aaPredicted RBP20.19■□□□□ 0.82
LIME1-204ENST00000476183 C1QAP02745 245 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 CD63P08962 238 aa20.19■□□□□ 0.82
LIME1-204ENST00000476183 EZRP15311 586 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms