RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-211	ENST00000475728	INHBA	P08476	426 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	ANXA5	P08758	320 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	CCDC166	P0CW27	439 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	RORA	P35398	523 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	SERPINB9	P50453	376 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	PGGT1B	P53609	377 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	GPS2	Q13227	327 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	FAM214A	Q32MH5	1076 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	ADCK2	Q7Z695	626 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	C17orf64	Q86WR6	236 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	SPNS2	Q8IVW8	549 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	ZNF655	Q8N720	491 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	OR56A3	Q8NH54	315 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	CT55	Q8WUE5	264 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	ANKRD49	Q8WVL7	239 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	STARD8	Q92502	1023 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	ZNF285	Q96NJ3	590 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	CATSPER2	Q96P56	530 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	UBL7	Q96S82	380 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	SGPP1	Q9BX95	441 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	SPRTN	Q9H040	489 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	CAB39L	Q9H9S4	337 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	SLC6A20	Q9NP91	592 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	PCMTD2	Q9NV79	361 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	TMEM184C	Q9NVA4	438 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	OARD1	Q9Y530	152 aa		13.85	□□□□□ -0.19
ABCF3-211	ENST00000475728	CCDC189	A1A4V9	331 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	CDC7	O00311	574 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	PHGDH	O43175	533 aa	Known RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	CTSV	O60911	334 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	KATNA1	O75449	491 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	FAM155B	O75949	473 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	WISP3	O95389	354 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	GUCA1C	O95843	209 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ITGB2	P05107	769 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ABHD2	P08910	425 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	RAB40AL	P0C0E4	278 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	PIM1	P11309	404 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	CNTF	P26441	200 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	GRK3	P35626	688 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	VSX2	P58304	361 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	SRSF6	Q13247	344 aa	Known RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	7e-9	■■■□□ 15.6
ABCF3-211	ENST00000475728	UAP1	Q16222	522 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	PPP1R3A	Q16821	1122 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	CDKL4	Q5MAI5	379 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	TEX35	Q5T0J7	233 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ZNF425	Q6IV72	752 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	LCTL	Q6UWM7	567 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	MBOAT1	Q6ZNC8	495 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	PAQR7	Q86WK9	346 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	TCAIM	Q8N3R3	496 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	TBC1D19	Q8N5T2	526 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	SLC38A9	Q8NBW4	561 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	RERG	Q96A58	199 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ALKBH8	Q96BT7	664 aa	Known RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	RNF31	Q96EP0	1072 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	EGFL8	Q99944	293 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	DHRS4	Q9BTZ2	278 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	ATG10	Q9H0Y0	220 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	CHST8	Q9H2A9	424 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	NMRAL1	Q9HBL8	299 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	TLK1	Q9UKI8	766 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	FARSA	Q9Y285	508 aa	Known RBP	13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728	PADI2	Q9Y2J8	665 aa		13.84	□□□□□ -0.19
ABCF3-211	ENST00000475728		A0A087X1B8	175 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728		A0A0J9YVX5	310 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	FITM1	A5D6W6	292 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	ERVH48-1	M5A8F1	160 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	TERT	O14746	1132 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	HCRTR1	O43613	425 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	KRT38	O76015	456 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	S100B	P04271	92 aa	Predicted RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	PRB1	P04280	392 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	WT1	P19544	449 aa	Predicted RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	PTPN4	P29074	926 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	MSH2	P43246	934 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	SERPINB8	P50452	374 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	EMP3	P54852	163 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	DCD	P81605	110 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	CSHL1	Q14406	222 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	TSN	Q15631	228 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	TAF1B	Q53T94	588 aa	Predicted RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	WASHC2D	Q5SRD0	308 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	LGSN	Q5TDP6	509 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	PRAMEF17	Q5VTA0	474 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	GPSM1	Q86YR5	675 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	LSM14A	Q8ND56	463 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	SLC44A1	Q8WWI5	657 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	MRRF	Q96E11	262 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	THAP11	Q96EK4	314 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	WBP1	Q96G27	269 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	UBXN10	Q96LJ8	280 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	NLN	Q9BYT8	704 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	CNOT10	Q9H9A5	744 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	IL17B	Q9UHF5	180 aa		13.83	□□□□□ -0.2
ABCF3-211	ENST00000475728	GPN3	Q9UHW5	284 aa	Predicted RBP	13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms