RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 EFHD1Q9BUP0 239 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ULBP3Q9BZM4 244 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 C12orf65Q9H3J6 166 aaKnown RBP15.1■□□□□ 0.01
CPSF3-203ENST00000475482 MVB12BQ9H7P6 319 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 FAM8A1Q9UBU6 413 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 MED16Q9Y2X0 877 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 SLC5A10A0PJK1 596 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 SYCE1LA8MT33 242 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 LIN7AO14910 233 aaPredicted RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 SMIM24O75264 130 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 SNRNP200O75643 2136 aaKnown RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 SNUPNO95149 360 aaKnown RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 FAM107AO95990 144 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 CD1DP15813 335 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 ITGB6P18564 788 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 TFEBP19484 476 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 BOP1Q14137 746 aaKnown RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 TECRLQ5HYJ1 363 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 PLEKHS1Q5SXH7 462 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 CYB5D1Q6P9G0 228 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 PPP1R3BQ86XI6 285 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 MYO1HQ8N1T3 1032 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 SIDT2Q8NBJ9 832 aaKnown RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 ANKRD49Q8WVL7 239 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 KIAA1191Q96A73 305 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF317Q96PQ6 595 aaPredicted RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 GPN2Q9H9Y4 310 aaPredicted RBP15.09■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF358Q9NW07 568 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 XPR1Q9UBH6 696 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 IL17BQ9UHF5 180 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 POMT2Q9UKY4 750 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 BTRCQ9Y297 605 aa15.09■□□□□ 0.01
CPSF3-203ENST00000475482 OR6C74A6NCV1 312 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 ZNF891A8MT65 544 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 MATN2O00339 956 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 IFRD1O00458 451 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 TRIM13O60858 407 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 TIAF1O95411 115 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 ZBTB11O95625 1053 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 SERPINE1P05121 402 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 TPBGLP0DKB5 382 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 ATP5F1P24539 256 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 ALDH3A1P30838 453 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 PREPP48147 710 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 NAA20P61599 178 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 HSD11B2P80365 405 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 ACY1Q03154 408 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 DLG1Q12959 904 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 KCNAB1Q14722 419 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 PCLAFQ15004 111 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 CHI3L2Q15782 390 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 LIPMQ5VYY2 423 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 TMEM207Q6UWW9 146 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 C6orf15Q6UXA7 325 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 ADAMTSL2Q86TH1 951 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 OR4E2Q8NGC2 313 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 BCAS4Q8TDM0 211 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 ASZ1Q8WWH4 475 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 TFGQ92734 400 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 KIAA1143Q96AT1 154 aaPredicted RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 FAM136AQ96C01 138 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 LINGO1Q96FE5 620 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 PPM1MQ96MI6 270 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 CATSPER2Q96P56 530 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 PITPNM3Q9BZ71 974 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 C1GALT1Q9NS00 363 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 OXSMQ9NWU1 459 aa15.08■□□□□ 0
CPSF3-203ENST00000475482 CPSF2Q9P2I0 782 aaKnown RBP15.08■□□□□ 0
CPSF3-203ENST00000475482 IQCF5A8MTL0 148 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 B8ZZF3 427 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 G3V2L1 256 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 BTN3A3O00478 584 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 NDUFAB1O14561 156 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 NKX2-8O15522 239 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 KIAA0754O94854 1291 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 MSL3P1P0C860 447 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 EBLN1P0CF75 366 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 POLR2CP19387 275 aaPredicted RBP15.07■□□□□ 0
CPSF3-203ENST00000475482 BGNP21810 368 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 F8A1P23610 371 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 AOAHP28039 575 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 PGGT1BP53609 377 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 SEC24CP53992 1094 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 PLOD1Q02809 727 aaPredicted RBP15.07■□□□□ 0
CPSF3-203ENST00000475482 STX3Q13277 289 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 TUBB3Q13509 450 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 ISCA2Q86U28 154 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 C10orf107Q8IVU9 208 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 CPNE9Q8IYJ1 553 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 SPATA6LQ8N4H0 392 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 GALNT6Q8NCL4 622 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 PHC3Q8NDX5 983 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 OR52E1Q8NGJ3 308 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 PPP4R1Q8TF05 950 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 EEF1AKMT1Q8WVE0 214 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 LCN9Q8WX39 176 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 ZNF501Q96CX3 271 aaPredicted RBP15.07■□□□□ 0
CPSF3-203ENST00000475482 FERD3LQ96RJ6 166 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 CCT8L2Q96SF2 557 aa15.07■□□□□ 0
CPSF3-203ENST00000475482 NRTNQ99748 197 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms