RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 HIF1AQ16665 826 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 MUM1Q2TAK8 710 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 DCAF10Q5QP82 559 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 RBM20Q5T481 1227 aaKnown RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 PRMT9Q6P2P2 845 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 PAQR3Q6TCH7 311 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 COX15Q7KZN9 410 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 HPS6Q86YV9 775 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 TMEM151BQ8IW70 566 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 CNTN4Q8IWV2 1026 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 LRRC56Q8IYG6 542 aaPredicted RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 MYO1HQ8N1T3 1032 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 DTWD1Q8N5C7 304 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 CSNK1A1LQ8N752 337 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 GPATCH11Q8N954 259 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 MCOLN3Q8TDD5 553 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 RERGQ96A58 199 aaPredicted RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 LRRC39Q96DD0 335 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 LINGO1Q96FE5 620 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 CABS1Q96KC9 395 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 CCDC138Q96M89 665 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 KRT12Q99456 494 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 SOX17Q9H6I2 414 aaPredicted RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 STOX2Q9P2F5 926 aaPredicted RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 SLC17A6Q9P2U8 582 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 RNF14Q9UBS8 474 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 NXT1Q9UKK6 140 aaKnown RBP10.95□□□□□ -0.66
GPM6B-208ENST00000475307 ADAMTS6Q9UKP5 1117 aa10.95□□□□□ -0.66
GPM6B-208ENST00000475307 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 IGKV1-8A0A0C4DH67 115 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 PABPN1LA6NDY0 278 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 H7BY64 318 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 AGPSO00116 658 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 KLHL41O60662 606 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 SEC31AO94979 1220 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 MED26O95402 600 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 HIST1H2AGP0C0S8 130 aaPredicted RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 EZRP15311 586 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 HIST1H2ADP20671 130 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 FBLP22087 321 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 MMP11P24347 488 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 IMPA1P29218 277 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 CDKN2DP55273 166 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 TIAL1Q01085 375 aaKnown RBP eCLIP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 OCA2Q04671 838 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 SP140Q13342 867 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 TEDDM1Q5T9Z0 273 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 HECTD2Q5U5R9 776 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ZNF425Q6IV72 752 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 TRMT10BQ6PF06 316 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 GALNT7Q86SF2 657 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ATCAYQ86WG3 371 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ALKBH8Q96BT7 664 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 MIEF2Q96C03 454 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 HIST1H2AHQ96KK5 128 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 PRAP1Q96NZ9 151 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 SPSB2Q99619 263 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 HIST1H2AJQ99878 128 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 H2AFJQ9BTM1 129 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 YIPF2Q9BWQ6 316 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 SLC26A1Q9H2B4 701 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 PARVBQ9HBI1 364 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 CCDC177Q9NQR7 707 aaPredicted RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 CUEDC1Q9NWM3 386 aaPredicted RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 CTSFQ9UBX1 484 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 ZNF282Q9UDV7 671 aaPredicted RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 CDC14AQ9UNH5 594 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 PDE10AQ9Y233 779 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 PLAAQ9Y263 795 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 RUVBL1Q9Y265 456 aaKnown RBP10.94□□□□□ -0.66
GPM6B-208ENST00000475307 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 TEX264Q9Y6I9 313 aa10.94□□□□□ -0.66
GPM6B-208ENST00000475307 MASP2O00187 686 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 TXNDC9O14530 226 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 NDC80O14777 642 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 HAT1O14929 419 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 SLC16A5O15375 505 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 PRPF4O43172 522 aaKnown RBP eCLIP10.93□□□□□ -0.66
GPM6B-208ENST00000475307 ALPPP05187 535 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 EMP3P54852 163 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 IL2P60568 153 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 TBPL1P62380 186 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 RELAQ04206 551 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 PDIA2Q13087 525 aaKnown RBP10.93□□□□□ -0.66
GPM6B-208ENST00000475307 MYBPC3Q14896 1274 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 RBBP7Q16576 425 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 HKDC1Q2TB90 917 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 PRTGQ2VWP7 1150 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 PRAMEF13Q5VWM6 474 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 STEAP4Q687X5 459 aa10.93□□□□□ -0.66
GPM6B-208ENST00000475307 FAM45BPQ6NSW5 357 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms